DNA Sensor ABCF1 Phase Separates With cccDNA to Inhibit Hepatitis B Virus Replication

Abstract Hepatitis B virus (HBV) covalently closed circular DNA (cccDNA) contributes to viral persistence and recurrence, however, how the host innate immune system responds to cccDNA is still less known. Here, based on cccDNA‐hepatic proteins interaction profiling, DNA sensor ATP‐binding cassette s...

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Main Authors: Caiyue Ren, Zhaoying Zhang, Yutong Dou, Yang Sun, Zhendong Fu, Liyuan Wang, Kai Wang, Chengjiang Gao, Yuchen Fan, Shuguo Sun, Xuetian Yue, Chunyang Li, Lifen Gao, Xiaohong Liang, Chunhong Ma, Zhuanchang Wu
Format: Article
Language:English
Published: Wiley 2024-12-01
Series:Advanced Science
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Online Access:https://doi.org/10.1002/advs.202409485
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author Caiyue Ren
Zhaoying Zhang
Yutong Dou
Yang Sun
Zhendong Fu
Liyuan Wang
Kai Wang
Chengjiang Gao
Yuchen Fan
Shuguo Sun
Xuetian Yue
Chunyang Li
Lifen Gao
Xiaohong Liang
Chunhong Ma
Zhuanchang Wu
author_facet Caiyue Ren
Zhaoying Zhang
Yutong Dou
Yang Sun
Zhendong Fu
Liyuan Wang
Kai Wang
Chengjiang Gao
Yuchen Fan
Shuguo Sun
Xuetian Yue
Chunyang Li
Lifen Gao
Xiaohong Liang
Chunhong Ma
Zhuanchang Wu
author_sort Caiyue Ren
collection DOAJ
description Abstract Hepatitis B virus (HBV) covalently closed circular DNA (cccDNA) contributes to viral persistence and recurrence, however, how the host innate immune system responds to cccDNA is still less known. Here, based on cccDNA‐hepatic proteins interaction profiling, DNA sensor ATP‐binding cassette subfamily F member 1 (ABCF1) is identified as a novel cccDNA‐binding protein and host restriction factor for HBV replication. Mechanistically, ABCF1 recognizes cccDNA by KKx4 motif and forms phase‐separated condensates by the poly‐glutamine (PolyQ) region of the N‐terminal intrinsically disordered low‐complexity domain (LCD). Subsequently, ABCF1‐cccDNA phase separation not only activates the type I/III interferon (IFN‐I/III) pathway but also prevents Pol II accumulation on cccDNA to inhibit HBV transcription. In turn, to sustain viral replication, HBV reduces ABCF1 expression by HBx‐mediated ubiquitination and degradation of SRY‐box transcription factor 4(SOX4), leading to defects in SOX4‐mediated upregulation of ABCF1 transcription. Taken together, the study shows that ABCF1 interacts with cccDNA to form phase separation that dually drives innate immune signaling and HBV transcriptional inhibition. These findings shed new light on the understanding of host defense against cccDNA and provide a novel promising therapeutic strategy for HBV infection.
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spelling doaj-art-fa3a44afe838477e8c2de0585dfbb6c02025-08-20T02:01:00ZengWileyAdvanced Science2198-38442024-12-011148n/an/a10.1002/advs.202409485DNA Sensor ABCF1 Phase Separates With cccDNA to Inhibit Hepatitis B Virus ReplicationCaiyue Ren0Zhaoying Zhang1Yutong Dou2Yang Sun3Zhendong Fu4Liyuan Wang5Kai Wang6Chengjiang Gao7Yuchen Fan8Shuguo Sun9Xuetian Yue10Chunyang Li11Lifen Gao12Xiaohong Liang13Chunhong Ma14Zhuanchang Wu15Key Laboratory for Experimental Teratology of Ministry of Education and Department of Immunology School of Basic Medical Sciences Cheeloo Medical College Shandong University Jinan Shandong 250012 ChinaKey Laboratory for Experimental Teratology of Ministry of Education and Department of Immunology School of Basic Medical Sciences Cheeloo Medical College Shandong University Jinan Shandong 250012 ChinaKey Laboratory for Experimental Teratology of Ministry of Education and Department of Immunology School of Basic Medical Sciences Cheeloo Medical College Shandong University Jinan Shandong 250012 ChinaKey Laboratory for Experimental Teratology of Ministry of Education and Department of Immunology School of Basic Medical Sciences Cheeloo Medical College Shandong University Jinan Shandong 250012 ChinaKey Laboratory for Experimental Teratology of Ministry of Education and Department of Immunology School of Basic Medical Sciences Cheeloo Medical College Shandong University Jinan Shandong 250012 ChinaKey Laboratory for Experimental Teratology of Ministry of Education and Department of Immunology School of Basic Medical Sciences Cheeloo Medical College Shandong University Jinan Shandong 250012 ChinaKey Laboratory for Experimental Teratology of Ministry of Education and Department of Immunology School of Basic Medical Sciences Cheeloo Medical College Shandong University Jinan Shandong 250012 ChinaKey Laboratory for Experimental Teratology of Ministry of Education and Department of Immunology School of Basic Medical Sciences Cheeloo Medical College Shandong University Jinan Shandong 250012 ChinaDepartment of Hepatology Qilu Hospital Cheeloo Medical College Shandong University Jinan Shandong 250012 ChinaDepartment of Human Anatomy, Histology and Embryology School of Basic Medicine Tongji Medical College Huazhong University of Science and Technology Wuhan Hubei 430030 ChinaDepartment of Cellular Biology School of Basic Medical Sciences Shandong University Jinan Shandong 250012 ChinaKey Laboratory for Experimental Teratology of the Ministry of Education Department of Histology and Embryology School of Basic Medical Sciences Shandong University Jinan Shandong 250012 ChinaKey Laboratory for Experimental Teratology of Ministry of Education and Department of Immunology School of Basic Medical Sciences Cheeloo Medical College Shandong University Jinan Shandong 250012 ChinaKey Laboratory for Experimental Teratology of Ministry of Education and Department of Immunology School of Basic Medical Sciences Cheeloo Medical College Shandong University Jinan Shandong 250012 ChinaKey Laboratory for Experimental Teratology of Ministry of Education and Department of Immunology School of Basic Medical Sciences Cheeloo Medical College Shandong University Jinan Shandong 250012 ChinaKey Laboratory for Experimental Teratology of Ministry of Education and Department of Immunology School of Basic Medical Sciences Cheeloo Medical College Shandong University Jinan Shandong 250012 ChinaAbstract Hepatitis B virus (HBV) covalently closed circular DNA (cccDNA) contributes to viral persistence and recurrence, however, how the host innate immune system responds to cccDNA is still less known. Here, based on cccDNA‐hepatic proteins interaction profiling, DNA sensor ATP‐binding cassette subfamily F member 1 (ABCF1) is identified as a novel cccDNA‐binding protein and host restriction factor for HBV replication. Mechanistically, ABCF1 recognizes cccDNA by KKx4 motif and forms phase‐separated condensates by the poly‐glutamine (PolyQ) region of the N‐terminal intrinsically disordered low‐complexity domain (LCD). Subsequently, ABCF1‐cccDNA phase separation not only activates the type I/III interferon (IFN‐I/III) pathway but also prevents Pol II accumulation on cccDNA to inhibit HBV transcription. In turn, to sustain viral replication, HBV reduces ABCF1 expression by HBx‐mediated ubiquitination and degradation of SRY‐box transcription factor 4(SOX4), leading to defects in SOX4‐mediated upregulation of ABCF1 transcription. Taken together, the study shows that ABCF1 interacts with cccDNA to form phase separation that dually drives innate immune signaling and HBV transcriptional inhibition. These findings shed new light on the understanding of host defense against cccDNA and provide a novel promising therapeutic strategy for HBV infection.https://doi.org/10.1002/advs.202409485ABCF1cccDNAHBVHBxphase separationtranscriptional machinery
spellingShingle Caiyue Ren
Zhaoying Zhang
Yutong Dou
Yang Sun
Zhendong Fu
Liyuan Wang
Kai Wang
Chengjiang Gao
Yuchen Fan
Shuguo Sun
Xuetian Yue
Chunyang Li
Lifen Gao
Xiaohong Liang
Chunhong Ma
Zhuanchang Wu
DNA Sensor ABCF1 Phase Separates With cccDNA to Inhibit Hepatitis B Virus Replication
Advanced Science
ABCF1
cccDNA
HBV
HBx
phase separation
transcriptional machinery
title DNA Sensor ABCF1 Phase Separates With cccDNA to Inhibit Hepatitis B Virus Replication
title_full DNA Sensor ABCF1 Phase Separates With cccDNA to Inhibit Hepatitis B Virus Replication
title_fullStr DNA Sensor ABCF1 Phase Separates With cccDNA to Inhibit Hepatitis B Virus Replication
title_full_unstemmed DNA Sensor ABCF1 Phase Separates With cccDNA to Inhibit Hepatitis B Virus Replication
title_short DNA Sensor ABCF1 Phase Separates With cccDNA to Inhibit Hepatitis B Virus Replication
title_sort dna sensor abcf1 phase separates with cccdna to inhibit hepatitis b virus replication
topic ABCF1
cccDNA
HBV
HBx
phase separation
transcriptional machinery
url https://doi.org/10.1002/advs.202409485
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