Extracting Physicochemical Features to Predict Protein Secondary Structure

We propose a protein secondary structure prediction method based on position-specific scoring matrix (PSSM) profiles and four physicochemical features including conformation parameters, net charges, hydrophobic, and side chain mass. First, the SVM with the optimal window size and the optimal paramet...

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Bibliographic Details
Main Authors: Yin-Fu Huang, Shu-Ying Chen
Format: Article
Language:English
Published: Wiley 2013-01-01
Series:The Scientific World Journal
Online Access:http://dx.doi.org/10.1155/2013/347106
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