Protocol to quantify energy landscape of high-dimensional oscillatory systems using diffusion decomposition

Summary: Here, we present a numerical framework to quantify the energy landscape of high-dimensional stochastic oscillatory systems, based on the diffusion decomposition of Gaussian approximation (DDGA). We describe steps for downloading codes, setting the oscillatory dynamics, and calculating the o...

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Bibliographic Details
Main Authors: Shirui Bian, Ruisong Zhou, Wei Lin, Chunhe Li
Format: Article
Language:English
Published: Elsevier 2025-09-01
Series:STAR Protocols
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S2666166725003284
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