TADBD: a sensitive and fast method for detection of typologically associated domain boundaries
A topologically associated domain (TAD) is a self-interacting genomic block. Detection of TAD boundaries on Hi-C contact matrix is one of the most important issues in the analysis of 3D genome architecture at TAD level. Here, we present TAD boundary detection (TADBD), a sensitive and fast computatio...
Saved in:
| Main Authors: | Hongqiang Lyu, Lin Li, Zhifang Wu, Tian Wang, Jiguang Zheng, Hongda Wang |
|---|---|
| Format: | Article |
| Language: | English |
| Published: |
Taylor & Francis Group
2020-07-01
|
| Series: | BioTechniques |
| Subjects: | |
| Online Access: | https://www.future-science.com/doi/10.2144/btn-2019-0165 |
| Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
Similar Items
-
Topologically associating domains of chromatin on single-cell Hi-C data: a survey of bioinformatic tools and applications in the light of artificial intelligence
by: Hongqiang Lyu, et al.
Published: (2025-07-01) -
Investigation of unified MHD boundary-layer flow of viscous fluid with variable viscosity and thermal conductivity using Haar wavelets
by: Sharath Kumar Shettigar, et al.
Published: (2025-12-01) -
Comparison of normalization methods for Hi-C data
by: Hongqiang Lyu, et al.
Published: (2020-02-01) -
BOUNDARY AND EXTERIOR OF A MULTISET TOPOLOGY
by: Debaroti Das, et al.
Published: (2016-07-01) -
Stability Analysis of Mass Transfer on a Continuous Flat Plate Moving in Parallel or Reversely to a Free Stream in the Presence of Chemical Reaction by Haar Wavelets
by: Vishwanath Awati, et al.
Published: (2025-01-01)