Nonproductive exposure of PBMCs to SARS‐CoV‐2 induces cell‐intrinsic innate immune responses

Abstract Cell‐intrinsic responses mounted in PBMCs during mild and severe COVID‐19 differ quantitatively and qualitatively. Whether they are triggered by signals emitted by productively infected cells of the respiratory tract or result from physical interaction with virus particles remains unclear....

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Main Authors: Julia Kazmierski, Kirstin Friedmann, Dylan Postmus, Jackson Emanuel, Cornelius Fischer, Jenny Jansen, Anja Richter, Laure Bosquillon de Jarcy, Christiane Schüler, Madlen Sohn, Sascha Sauer, Christian Drosten, Antoine‐Emmanuel Saliba, Leif Erik Sander, Marcel A Müller, Daniela Niemeyer, Christine Goffinet
Format: Article
Language:English
Published: Springer Nature 2022-08-01
Series:Molecular Systems Biology
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Online Access:https://doi.org/10.15252/msb.202210961
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author Julia Kazmierski
Kirstin Friedmann
Dylan Postmus
Jackson Emanuel
Cornelius Fischer
Jenny Jansen
Anja Richter
Laure Bosquillon de Jarcy
Christiane Schüler
Madlen Sohn
Sascha Sauer
Christian Drosten
Antoine‐Emmanuel Saliba
Leif Erik Sander
Marcel A Müller
Daniela Niemeyer
Christine Goffinet
author_facet Julia Kazmierski
Kirstin Friedmann
Dylan Postmus
Jackson Emanuel
Cornelius Fischer
Jenny Jansen
Anja Richter
Laure Bosquillon de Jarcy
Christiane Schüler
Madlen Sohn
Sascha Sauer
Christian Drosten
Antoine‐Emmanuel Saliba
Leif Erik Sander
Marcel A Müller
Daniela Niemeyer
Christine Goffinet
author_sort Julia Kazmierski
collection DOAJ
description Abstract Cell‐intrinsic responses mounted in PBMCs during mild and severe COVID‐19 differ quantitatively and qualitatively. Whether they are triggered by signals emitted by productively infected cells of the respiratory tract or result from physical interaction with virus particles remains unclear. Here, we analyzed susceptibility and expression profiles of PBMCs from healthy donors upon ex vivo exposure to SARS‐CoV and SARS‐CoV‐2. In line with the absence of detectable ACE2 receptor expression, human PBMCs were refractory to productive infection. RT–PCR experiments and single‐cell RNA sequencing revealed JAK/STAT‐dependent induction of interferon‐stimulated genes (ISGs) but not proinflammatory cytokines. This SARS‐CoV‐2‐specific response was most pronounced in monocytes. SARS‐CoV‐2‐RNA‐positive monocytes displayed a lower ISG signature as compared to bystander cells of the identical culture. This suggests a preferential invasion of cells with a low ISG baseline profile or delivery of a SARS‐CoV‐2‐specific sensing antagonist upon efficient particle internalization. Together, nonproductive physical interaction of PBMCs with SARS‐CoV‐2‐ and, to a much lesser extent, SARS‐CoV particles stimulate JAK/STAT‐dependent, monocyte‐accentuated innate immune responses that resemble those detected in vivo in patients with mild COVID‐19.
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spelling doaj-art-bd2eb001419145ec893ee0b1a1a9d0932025-08-20T04:02:49ZengSpringer NatureMolecular Systems Biology1744-42922022-08-0118811610.15252/msb.202210961Nonproductive exposure of PBMCs to SARS‐CoV‐2 induces cell‐intrinsic innate immune responsesJulia Kazmierski0Kirstin Friedmann1Dylan Postmus2Jackson Emanuel3Cornelius Fischer4Jenny Jansen5Anja Richter6Laure Bosquillon de Jarcy7Christiane Schüler8Madlen Sohn9Sascha Sauer10Christian Drosten11Antoine‐Emmanuel Saliba12Leif Erik Sander13Marcel A Müller14Daniela Niemeyer15Christine Goffinet16Institute of Virology, Campus Charité Mitte, Charité – Universitätsmedizin BerlinInstitute of Virology, Campus Charité Mitte, Charité – Universitätsmedizin BerlinInstitute of Virology, Campus Charité Mitte, Charité – Universitätsmedizin BerlinInstitute of Virology, Campus Charité Mitte, Charité – Universitätsmedizin BerlinScientific Genomics Platforms, Laboratory of Functional Genomics, Nutrigenomics and Systems Biology, Max Delbrück Center for Molecular MedicineInstitute of Virology, Campus Charité Mitte, Charité – Universitätsmedizin BerlinInstitute of Virology, Campus Charité Mitte, Charité – Universitätsmedizin BerlinInstitute of Virology, Campus Charité Mitte, Charité – Universitätsmedizin BerlinInstitute of Virology, Campus Charité Mitte, Charité – Universitätsmedizin BerlinScientific Genomics Platforms, Laboratory of Functional Genomics, Nutrigenomics and Systems Biology, Max Delbrück Center for Molecular MedicineScientific Genomics Platforms, Laboratory of Functional Genomics, Nutrigenomics and Systems Biology, Max Delbrück Center for Molecular MedicineInstitute of Virology, Campus Charité Mitte, Charité – Universitätsmedizin BerlinHelmholtz Institute for RNA‐based Infection Research (HIRI), Helmholtz‐Center for Infection Research (HZI)Department of Infectious Diseases and Respiratory Medicine, Charité ‐ Universitätsmedizin Berlin, Corporate Member of Freie Universität Berlin, Humboldt‐Universität zu Berlin, and Berlin Institute of Health (BIH)Institute of Virology, Campus Charité Mitte, Charité – Universitätsmedizin BerlinInstitute of Virology, Campus Charité Mitte, Charité – Universitätsmedizin BerlinInstitute of Virology, Campus Charité Mitte, Charité – Universitätsmedizin BerlinAbstract Cell‐intrinsic responses mounted in PBMCs during mild and severe COVID‐19 differ quantitatively and qualitatively. Whether they are triggered by signals emitted by productively infected cells of the respiratory tract or result from physical interaction with virus particles remains unclear. Here, we analyzed susceptibility and expression profiles of PBMCs from healthy donors upon ex vivo exposure to SARS‐CoV and SARS‐CoV‐2. In line with the absence of detectable ACE2 receptor expression, human PBMCs were refractory to productive infection. RT–PCR experiments and single‐cell RNA sequencing revealed JAK/STAT‐dependent induction of interferon‐stimulated genes (ISGs) but not proinflammatory cytokines. This SARS‐CoV‐2‐specific response was most pronounced in monocytes. SARS‐CoV‐2‐RNA‐positive monocytes displayed a lower ISG signature as compared to bystander cells of the identical culture. This suggests a preferential invasion of cells with a low ISG baseline profile or delivery of a SARS‐CoV‐2‐specific sensing antagonist upon efficient particle internalization. Together, nonproductive physical interaction of PBMCs with SARS‐CoV‐2‐ and, to a much lesser extent, SARS‐CoV particles stimulate JAK/STAT‐dependent, monocyte‐accentuated innate immune responses that resemble those detected in vivo in patients with mild COVID‐19.https://doi.org/10.15252/msb.202210961interferoninterferon‐stimulated genesPBMCsSARS‐CoV‐2
spellingShingle Julia Kazmierski
Kirstin Friedmann
Dylan Postmus
Jackson Emanuel
Cornelius Fischer
Jenny Jansen
Anja Richter
Laure Bosquillon de Jarcy
Christiane Schüler
Madlen Sohn
Sascha Sauer
Christian Drosten
Antoine‐Emmanuel Saliba
Leif Erik Sander
Marcel A Müller
Daniela Niemeyer
Christine Goffinet
Nonproductive exposure of PBMCs to SARS‐CoV‐2 induces cell‐intrinsic innate immune responses
Molecular Systems Biology
interferon
interferon‐stimulated genes
PBMCs
SARS‐CoV‐2
title Nonproductive exposure of PBMCs to SARS‐CoV‐2 induces cell‐intrinsic innate immune responses
title_full Nonproductive exposure of PBMCs to SARS‐CoV‐2 induces cell‐intrinsic innate immune responses
title_fullStr Nonproductive exposure of PBMCs to SARS‐CoV‐2 induces cell‐intrinsic innate immune responses
title_full_unstemmed Nonproductive exposure of PBMCs to SARS‐CoV‐2 induces cell‐intrinsic innate immune responses
title_short Nonproductive exposure of PBMCs to SARS‐CoV‐2 induces cell‐intrinsic innate immune responses
title_sort nonproductive exposure of pbmcs to sars cov 2 induces cell intrinsic innate immune responses
topic interferon
interferon‐stimulated genes
PBMCs
SARS‐CoV‐2
url https://doi.org/10.15252/msb.202210961
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