ARGContextProfiler: extracting and scoring the genomic contexts of antibiotic resistance genes using assembly graphs

Antibiotic resistance (AR) presents a global health challenge, necessitating an improved understanding of the ecology, evolution, and dissemination of antibiotic resistance genes (ARGs). Several tools, databases, and algorithms are now available to facilitate the identification of ARGs in metagenomi...

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Bibliographic Details
Main Authors: Nazifa Ahmed Moumi, Shafayat Ahmed, Connor Brown, Amy Pruden, Liqing Zhang
Format: Article
Language:English
Published: Frontiers Media S.A. 2025-05-01
Series:Frontiers in Microbiology
Subjects:
Online Access:https://www.frontiersin.org/articles/10.3389/fmicb.2025.1604461/full
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