Bag-of-words is competitive with sum-of-embeddings language-inspired representations on protein inference.

Inferring protein function is a fundamental and long-standing problem in biology. Laboratory experiments in this field are often expensive, and therefore large-scale computational protein inference from readily available amino acid sequences is needed to understand in more detail the mechanisms unde...

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Bibliographic Details
Main Authors: Frixos Papadopoulos, Tilman Sanchez-Elsner, Mahesan Niranjan, Ashley I Heinson
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2025-01-01
Series:PLoS ONE
Online Access:https://doi.org/10.1371/journal.pone.0325531
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