Apollo: a comprehensive GPU-powered within-host simulator for viral evolution and infection dynamics across population, tissue, and cell

Apollo: a comprehensive GPU-powered within-host simulator for viral evolution and infection dynamics across population, tissue, and cell

Abstract Modern sequencing instruments bring unprecedented opportunity to study within-host viral evolution in conjunction with viral transmissions between hosts. However, no computational simulators are available to assist the characterization of within-host dynamics. This limits our ability to int...

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Main Authors: Deshan Perera, Evan Li, Paul MK Gordon, Frank van der Meer, Tarah Lynch, John Gill, Deirdre L. Church, A. P. Jason de Koning, Christian D. Huber, Guido van Marle, Alexander Platt, Quan Long
Format: Article
Language:English
Published: Nature Portfolio 2025-07-01
Series:Nature Communications
Online Access:https://doi.org/10.1038/s41467-025-60988-8
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https://doi.org/10.1038/s41467-025-60988-8

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