dotears: Scalable and consistent directed acyclic graph estimation using observational and interventional data

Summary: New assays such as Perturb-seq link parallel CRISPR interventions to transcriptomic readouts, providing insight into gene regulatory networks. Causal regulatory networks can be represented by directed acyclic graphs (DAGs), but lack of identifiability and a combinatorial solution space comp...

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Bibliographic Details
Main Authors: Albert Xue, Jingyou Rao, Sriram Sankararaman, Harold Pimentel
Format: Article
Language:English
Published: Elsevier 2025-02-01
Series:iScience
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S2589004224029006
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