CNRein: an evolution-aware deep reinforcement learning algorithm for single-cell DNA copy number calling
Abstract Low-pass single-cell DNA sequencing technologies and algorithmic advancements have enabled haplotype-specific copy number calling on thousands of cells within tumors. However, measurement uncertainty may result in spurious CNAs inconsistent with realistic evolutionary constraints. We introd...
Saved in:
| Main Authors: | Stefan Ivanovic, Mohammed El-Kebir |
|---|---|
| Format: | Article |
| Language: | English |
| Published: |
BMC
2025-04-01
|
| Series: | Genome Biology |
| Online Access: | https://doi.org/10.1186/s13059-025-03553-2 |
| Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
Similar Items
-
Distribution of copy number alterations and impact of chromosome arm call thresholds for meningioma
by: Ruchit V. Patel, et al.
Published: (2025-07-01) -
Variation of DNA copies number in etiology of congenital heart defects
by: A. A. Slepukhina, et al.
Published: (2018-11-01) -
Ribosomal DNA copy number loss and sequence variation in cancer.
by: Baoshan Xu, et al.
Published: (2017-06-01) -
Dosage sensitivity shapes the evolution of copy-number varied regions.
by: Benjamin Schuster-Böckler, et al.
Published: (2010-03-01) -
Investigating the genetic association of mitochondrial DNA copy number with neurodegenerative diseases
by: Huan Xia, et al.
Published: (2025-04-01)