Circulating Dynamics of SARS-CoV-2 Variants between April 2021 and February 2022 in Turkey
The diagnosis of new variants and monitoring their potential effects on diagnosis, therapeutics, and vaccines by genomic sequencing is essential to manage global public crises. In the current study, spike-genome next-generation sequencing was generated from 492 SARS-CoV-2 isolates to evaluate the mu...
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| Format: | Article |
| Language: | English |
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Wiley
2022-01-01
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| Series: | Canadian Journal of Infectious Diseases and Medical Microbiology |
| Online Access: | http://dx.doi.org/10.1155/2022/4677720 |
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| _version_ | 1832562418974195712 |
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| author | Murat Sayan Ayse Arikan Murat Isbilen |
| author_facet | Murat Sayan Ayse Arikan Murat Isbilen |
| author_sort | Murat Sayan |
| collection | DOAJ |
| description | The diagnosis of new variants and monitoring their potential effects on diagnosis, therapeutics, and vaccines by genomic sequencing is essential to manage global public crises. In the current study, spike-genome next-generation sequencing was generated from 492 SARS-CoV-2 isolates to evaluate the mutations in Turkey from April 2021 to February 2022. The variant analysis was performed using (Coronavirus Antiviral and Resistance Database (CoV-RDB) by Stanford University). We revealed that the lineages Alpha (B.1.1.7), Beta (B.1.351), Delta (B.1.617.2), Eta (B.1.525), variant of interest (VOI), lota (B.1.526), Zeta (P.2), Omicron (B.1.1.529), and Omicron BA.1 (B.1.1.529.1) were in the circulation in Turkey during the given period. The most common lineages were B.1.1.7, B.1.617.2, B.1.1.529, and B.1.1.529.1 SARS-CoV-2 variant circulation in Turkey seems highly heterogenetic; however, quite similar to the global epidemiologic analysis. The existence of globally circulating variants in the same chronological order in Turkey can be a guide for precautions, treatment, and vaccine options to be taken in the future. |
| format | Article |
| id | doaj-art-944de415da39478eb3f290da04e5a6d0 |
| institution | Kabale University |
| issn | 1918-1493 |
| language | English |
| publishDate | 2022-01-01 |
| publisher | Wiley |
| record_format | Article |
| series | Canadian Journal of Infectious Diseases and Medical Microbiology |
| spelling | doaj-art-944de415da39478eb3f290da04e5a6d02025-02-03T01:22:41ZengWileyCanadian Journal of Infectious Diseases and Medical Microbiology1918-14932022-01-01202210.1155/2022/4677720Circulating Dynamics of SARS-CoV-2 Variants between April 2021 and February 2022 in TurkeyMurat Sayan0Ayse Arikan1Murat Isbilen2Kocaeli UniversityNear East UniversityAcibadem Mehmet Ali Aydinlar UniversityThe diagnosis of new variants and monitoring their potential effects on diagnosis, therapeutics, and vaccines by genomic sequencing is essential to manage global public crises. In the current study, spike-genome next-generation sequencing was generated from 492 SARS-CoV-2 isolates to evaluate the mutations in Turkey from April 2021 to February 2022. The variant analysis was performed using (Coronavirus Antiviral and Resistance Database (CoV-RDB) by Stanford University). We revealed that the lineages Alpha (B.1.1.7), Beta (B.1.351), Delta (B.1.617.2), Eta (B.1.525), variant of interest (VOI), lota (B.1.526), Zeta (P.2), Omicron (B.1.1.529), and Omicron BA.1 (B.1.1.529.1) were in the circulation in Turkey during the given period. The most common lineages were B.1.1.7, B.1.617.2, B.1.1.529, and B.1.1.529.1 SARS-CoV-2 variant circulation in Turkey seems highly heterogenetic; however, quite similar to the global epidemiologic analysis. The existence of globally circulating variants in the same chronological order in Turkey can be a guide for precautions, treatment, and vaccine options to be taken in the future.http://dx.doi.org/10.1155/2022/4677720 |
| spellingShingle | Murat Sayan Ayse Arikan Murat Isbilen Circulating Dynamics of SARS-CoV-2 Variants between April 2021 and February 2022 in Turkey Canadian Journal of Infectious Diseases and Medical Microbiology |
| title | Circulating Dynamics of SARS-CoV-2 Variants between April 2021 and February 2022 in Turkey |
| title_full | Circulating Dynamics of SARS-CoV-2 Variants between April 2021 and February 2022 in Turkey |
| title_fullStr | Circulating Dynamics of SARS-CoV-2 Variants between April 2021 and February 2022 in Turkey |
| title_full_unstemmed | Circulating Dynamics of SARS-CoV-2 Variants between April 2021 and February 2022 in Turkey |
| title_short | Circulating Dynamics of SARS-CoV-2 Variants between April 2021 and February 2022 in Turkey |
| title_sort | circulating dynamics of sars cov 2 variants between april 2021 and february 2022 in turkey |
| url | http://dx.doi.org/10.1155/2022/4677720 |
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