Equivariant diffusion for structure-based de novo ligand generation with latent-conditioning

Abstract We introduce PoLiGenX, a novel generative model for de novo ligand design that employs latent-conditioned, target-aware equivariant diffusion. Our approach leverages the conditioning of the ligand generation process on reference molecules located within a specific protein pocket. By doing s...

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Bibliographic Details
Main Authors: Tuan Le, Julian Cremer, Djork-Arné Clevert, Kristof T. Schütt
Format: Article
Language:English
Published: BMC 2025-05-01
Series:Journal of Cheminformatics
Subjects:
Online Access:https://doi.org/10.1186/s13321-025-01028-x
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