Phylogroup Homeostasis of <i>Escherichia coli</i> in the Human Gut Reflects the Physiological State of the Host

Phylogroup Homeostasis of <i>Escherichia coli</i> in the Human Gut Reflects the Physiological State of the Host

The advent of alignment-free <i>k</i>-mer barcoding has revolutionized taxonomic analysis, enabling bacterial identification at phylogroup resolution within natural communities. We applied this approach to characterize <i>Escherichia coli</i> intraspecific diversity in human...

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Bibliographic Details
Main Authors: Maria S. Frolova, Sergey S. Kiselev, Valery V. Panyukov, Olga N. Ozoline
Format: Article
Language:English
Published: MDPI AG 2025-07-01
Series:Microorganisms
Subjects:
<i>E. coli</i> phylogroups
<i>k</i>-mer-based intraspecific phylotyping
interspecific relationships
bimodality
colorectal disorders
antibiotic treatment
Online Access:https://www.mdpi.com/2076-2607/13/7/1584
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