SpatialLeiden: spatially aware Leiden clustering

SpatialLeiden: spatially aware Leiden clustering

Abstract Clustering can identify the natural structure that is inherent to measured data. For single-cell omics, clustering finds cells with similar molecular phenotype after which cell types are annotated. Leiden clustering is one of the algorithms of choice in the single-cell community. In the fie...

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Bibliographic Details
Main Authors: Niklas Müller-Bötticher, Shashwat Sahay, Roland Eils, Naveed Ishaque
Format: Article
Language:English
Published: BMC 2025-02-01
Series:Genome Biology
Subjects:
Spatial omics
Clustering
Leiden
Domains
Niches
Spatial clustering
Online Access:https://doi.org/10.1186/s13059-025-03489-7
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https://doi.org/10.1186/s13059-025-03489-7

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