The role of pangenomics in orphan crop improvement

Abstract Global food security depends heavily on a few staple crops, while orphan crops, despite being less studied, offer the potential benefits of environmental adaptation and enhanced nutritional traits, especially in a changing climate. Major crops have benefited from genomics-based breeding, in...

Full description

Saved in:
Bibliographic Details
Main Authors: Haifei Hu, Junliang Zhao, William J. W. Thomas, Jacqueline Batley, David Edwards
Format: Article
Language:English
Published: Nature Portfolio 2025-01-01
Series:Nature Communications
Online Access:https://doi.org/10.1038/s41467-024-55260-4
Tags: Add Tag
No Tags, Be the first to tag this record!
_version_ 1841559224823316480
author Haifei Hu
Junliang Zhao
William J. W. Thomas
Jacqueline Batley
David Edwards
author_facet Haifei Hu
Junliang Zhao
William J. W. Thomas
Jacqueline Batley
David Edwards
author_sort Haifei Hu
collection DOAJ
description Abstract Global food security depends heavily on a few staple crops, while orphan crops, despite being less studied, offer the potential benefits of environmental adaptation and enhanced nutritional traits, especially in a changing climate. Major crops have benefited from genomics-based breeding, initially using single genomes and later pangenomes. Recent advances in DNA sequencing have enabled pangenome construction for several orphan crops, offering a more comprehensive understanding of genetic diversity. Orphan crop research has now entered the pangenomics era and applying these pangenomes with advanced selection methods and genome editing technologies can transform these neglected species into crops of broader agricultural significance.
format Article
id doaj-art-8661db8a095d4796ace566b03cf65250
institution Kabale University
issn 2041-1723
language English
publishDate 2025-01-01
publisher Nature Portfolio
record_format Article
series Nature Communications
spelling doaj-art-8661db8a095d4796ace566b03cf652502025-01-05T12:39:49ZengNature PortfolioNature Communications2041-17232025-01-011611910.1038/s41467-024-55260-4The role of pangenomics in orphan crop improvementHaifei Hu0Junliang Zhao1William J. W. Thomas2Jacqueline Batley3David Edwards4Rice Research Institute, Guangdong Academy of Agricultural Sciences & Key Laboratory of Genetics and Breeding of High Quality Rice in Southern China (Co-construction by Ministry and Province), Ministry of Agriculture and Rural Affairs & Guangdong Key Laboratory of Rice Science and TechnologyRice Research Institute, Guangdong Academy of Agricultural Sciences & Key Laboratory of Genetics and Breeding of High Quality Rice in Southern China (Co-construction by Ministry and Province), Ministry of Agriculture and Rural Affairs & Guangdong Key Laboratory of Rice Science and TechnologySchool of Biological Sciences, University of Western AustraliaSchool of Biological Sciences, University of Western AustraliaSchool of Biological Sciences, University of Western AustraliaAbstract Global food security depends heavily on a few staple crops, while orphan crops, despite being less studied, offer the potential benefits of environmental adaptation and enhanced nutritional traits, especially in a changing climate. Major crops have benefited from genomics-based breeding, initially using single genomes and later pangenomes. Recent advances in DNA sequencing have enabled pangenome construction for several orphan crops, offering a more comprehensive understanding of genetic diversity. Orphan crop research has now entered the pangenomics era and applying these pangenomes with advanced selection methods and genome editing technologies can transform these neglected species into crops of broader agricultural significance.https://doi.org/10.1038/s41467-024-55260-4
spellingShingle Haifei Hu
Junliang Zhao
William J. W. Thomas
Jacqueline Batley
David Edwards
The role of pangenomics in orphan crop improvement
Nature Communications
title The role of pangenomics in orphan crop improvement
title_full The role of pangenomics in orphan crop improvement
title_fullStr The role of pangenomics in orphan crop improvement
title_full_unstemmed The role of pangenomics in orphan crop improvement
title_short The role of pangenomics in orphan crop improvement
title_sort role of pangenomics in orphan crop improvement
url https://doi.org/10.1038/s41467-024-55260-4
work_keys_str_mv AT haifeihu theroleofpangenomicsinorphancropimprovement
AT junliangzhao theroleofpangenomicsinorphancropimprovement
AT williamjwthomas theroleofpangenomicsinorphancropimprovement
AT jacquelinebatley theroleofpangenomicsinorphancropimprovement
AT davidedwards theroleofpangenomicsinorphancropimprovement
AT haifeihu roleofpangenomicsinorphancropimprovement
AT junliangzhao roleofpangenomicsinorphancropimprovement
AT williamjwthomas roleofpangenomicsinorphancropimprovement
AT jacquelinebatley roleofpangenomicsinorphancropimprovement
AT davidedwards roleofpangenomicsinorphancropimprovement