Projected Gradient Descent Method for Tropical Principal Component Analysis over Tree Space

Tropical Principal Component Analysis (PCA) is an analogue of the classical PCA in the setting of tropical geometry, and applied it to visualize a set of gene trees over a space of phylogenetic trees, which is a union of lower-dimensional polyhedral cones in an Euclidean space with dimension <inl...

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Bibliographic Details
Main Author: Ruriko Yoshida
Format: Article
Language:English
Published: MDPI AG 2025-05-01
Series:Mathematics
Subjects:
Online Access:https://www.mdpi.com/2227-7390/13/11/1776
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