Complete chloroplast genome and phylogenetic analysis of Lonicera microphylla Willd. ex Roem. & Schult. 1819 Caprifoliaceae
Lonicera microphylla Willd. ex Roem. & Schult. 1819 is a medicinal plant species, especially for treating chronic fever and dysentery. This study aimed to characterize the chloroplast genome of L. microphylla and reconstruct the phylogenetic relationships among Lonicera Linn. 1753. The circular...
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| Format: | Article |
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Taylor & Francis Group
2024-11-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | https://www.tandfonline.com/doi/10.1080/23802359.2024.2427103 |
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| author | Xiaomei Wei Ying Hu Baoyou Huang Yude Peng Yanxia Zhu Fan Wei |
| author_facet | Xiaomei Wei Ying Hu Baoyou Huang Yude Peng Yanxia Zhu Fan Wei |
| author_sort | Xiaomei Wei |
| collection | DOAJ |
| description | Lonicera microphylla Willd. ex Roem. & Schult. 1819 is a medicinal plant species, especially for treating chronic fever and dysentery. This study aimed to characterize the chloroplast genome of L. microphylla and reconstruct the phylogenetic relationships among Lonicera Linn. 1753. The circular complete chloroplast genome is 154,945 bp in length, with two inverted repeat regions (IRs; 23,841 bp), separated by a small single-copy region (SSC; 18,789 bp) and a large single-copy region (LSC; 88,474 bp). The overall GC content of L. microphylla plastome was 38.36%. The chloroplast genome encoded a total of 131 genes, including 84 protein-coding genes, 39 tRNA genes, and eight rRNA genes. Phylogenetic analysis reveals that L. microphylla was more closely related to Lonicera tangutica Maxim. 1878. Our result can provide reference for the phylogenetic relationship, resource development, and utilization of Lonicera. |
| format | Article |
| id | doaj-art-80945b0c5bb64779870b770959baeadb |
| institution | Kabale University |
| issn | 2380-2359 |
| language | English |
| publishDate | 2024-11-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj-art-80945b0c5bb64779870b770959baeadb2024-12-23T06:12:38ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592024-11-019111533153810.1080/23802359.2024.2427103Complete chloroplast genome and phylogenetic analysis of Lonicera microphylla Willd. ex Roem. & Schult. 1819 CaprifoliaceaeXiaomei Wei0Ying Hu1Baoyou Huang2Yude Peng3Yanxia Zhu4Fan Wei5National Center for TCM Inheritance and Innovation, Guangxi Key Laboratory of Medicinal Resources Protection and Genetic Improvement, Guangxi Botanical Garden of Medicinal Plants, Nanning, ChinaNational Center for TCM Inheritance and Innovation, Guangxi Key Laboratory of Medicinal Resources Protection and Genetic Improvement, Guangxi Botanical Garden of Medicinal Plants, Nanning, ChinaNational Center for TCM Inheritance and Innovation, Guangxi Key Laboratory of Medicinal Resources Protection and Genetic Improvement, Guangxi Botanical Garden of Medicinal Plants, Nanning, ChinaNational Center for TCM Inheritance and Innovation, Guangxi Key Laboratory of Medicinal Resources Protection and Genetic Improvement, Guangxi Botanical Garden of Medicinal Plants, Nanning, ChinaNational Center for TCM Inheritance and Innovation, Guangxi Key Laboratory of Medicinal Resources Protection and Genetic Improvement, Guangxi Botanical Garden of Medicinal Plants, Nanning, ChinaNational Center for TCM Inheritance and Innovation, Guangxi Key Laboratory of Medicinal Resources Protection and Genetic Improvement, Guangxi Botanical Garden of Medicinal Plants, Nanning, ChinaLonicera microphylla Willd. ex Roem. & Schult. 1819 is a medicinal plant species, especially for treating chronic fever and dysentery. This study aimed to characterize the chloroplast genome of L. microphylla and reconstruct the phylogenetic relationships among Lonicera Linn. 1753. The circular complete chloroplast genome is 154,945 bp in length, with two inverted repeat regions (IRs; 23,841 bp), separated by a small single-copy region (SSC; 18,789 bp) and a large single-copy region (LSC; 88,474 bp). The overall GC content of L. microphylla plastome was 38.36%. The chloroplast genome encoded a total of 131 genes, including 84 protein-coding genes, 39 tRNA genes, and eight rRNA genes. Phylogenetic analysis reveals that L. microphylla was more closely related to Lonicera tangutica Maxim. 1878. Our result can provide reference for the phylogenetic relationship, resource development, and utilization of Lonicera.https://www.tandfonline.com/doi/10.1080/23802359.2024.2427103Chloroplast genomeLoniceraphylogenetic analysis |
| spellingShingle | Xiaomei Wei Ying Hu Baoyou Huang Yude Peng Yanxia Zhu Fan Wei Complete chloroplast genome and phylogenetic analysis of Lonicera microphylla Willd. ex Roem. & Schult. 1819 Caprifoliaceae Mitochondrial DNA. Part B. Resources Chloroplast genome Lonicera phylogenetic analysis |
| title | Complete chloroplast genome and phylogenetic analysis of Lonicera microphylla Willd. ex Roem. & Schult. 1819 Caprifoliaceae |
| title_full | Complete chloroplast genome and phylogenetic analysis of Lonicera microphylla Willd. ex Roem. & Schult. 1819 Caprifoliaceae |
| title_fullStr | Complete chloroplast genome and phylogenetic analysis of Lonicera microphylla Willd. ex Roem. & Schult. 1819 Caprifoliaceae |
| title_full_unstemmed | Complete chloroplast genome and phylogenetic analysis of Lonicera microphylla Willd. ex Roem. & Schult. 1819 Caprifoliaceae |
| title_short | Complete chloroplast genome and phylogenetic analysis of Lonicera microphylla Willd. ex Roem. & Schult. 1819 Caprifoliaceae |
| title_sort | complete chloroplast genome and phylogenetic analysis of lonicera microphylla willd ex roem schult 1819 caprifoliaceae |
| topic | Chloroplast genome Lonicera phylogenetic analysis |
| url | https://www.tandfonline.com/doi/10.1080/23802359.2024.2427103 |
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