Alignment-free detection and seed-based identification of multi-loci V(D)J recombinations in Vidjil-algo

The diversity of the immune repertoire is grounded on V(D)J recombinations in several loci. Many algorithms and software detect and designate these recombinations in high-throughput sequencing data. To improve their efficiency, we propose a multi-loci seed identification through an Aho-Corasick like...

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Bibliographic Details
Main Authors: Borée, Cyprien, Giraud, Mathieu, Salson, Mikaël
Format: Article
Language:English
Published: Peer Community In 2025-04-01
Series:Peer Community Journal
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Online Access:https://peercommunityjournal.org/articles/10.24072/pcjournal.547/
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