Loop Catalog: a comprehensive HiChIP database of human and mouse samples

Loop Catalog: a comprehensive HiChIP database of human and mouse samples

Abstract HiChIP enables cost-effective and high-resolution profiling of chromatin loops. To leverage the increasing number of HiChIP datasets, we develop Loop Catalog ( https://loopcatalog.lji.org ), a web-based database featuring loop calls from over 1000 distinct human and mouse HiChIP samples fro...

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Bibliographic Details
Main Authors: Joaquin Reyna, Kyra Fetter, Romeo Ignacio, Cemil Can Ali Marandi, Astoria Ma, Nikhil Rao, Zichen Jiang, Daniela Salgado Figueroa, Sourya Bhattacharyya, Ferhat Ay
Format: Article
Language:English
Published: BMC 2025-06-01
Series:Genome Biology
Subjects:
HiChIP
Chromatin loops
Database
GWAS
SNP-to-gene linking
Online Access:https://doi.org/10.1186/s13059-025-03615-5
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https://doi.org/10.1186/s13059-025-03615-5

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