Inferring Strain Mixture within Clinical Plasmodium falciparum Isolates from Genomic Sequence Data.
We present a rigorous statistical model that infers the structure of P. falciparum mixtures-including the number of strains present, their proportion within the samples, and the amount of unexplained mixture-using whole genome sequence (WGS) data. Applied to simulation data, artificial laboratory mi...
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| Main Authors: | John D O'Brien, Zamin Iqbal, Jason Wendler, Lucas Amenga-Etego |
|---|---|
| Format: | Article |
| Language: | English |
| Published: |
Public Library of Science (PLoS)
2016-06-01
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| Series: | PLoS Computational Biology |
| Online Access: | https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1004824&type=printable |
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