Inferring Strain Mixture within Clinical Plasmodium falciparum Isolates from Genomic Sequence Data.

We present a rigorous statistical model that infers the structure of P. falciparum mixtures-including the number of strains present, their proportion within the samples, and the amount of unexplained mixture-using whole genome sequence (WGS) data. Applied to simulation data, artificial laboratory mi...

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Bibliographic Details
Main Authors: John D O'Brien, Zamin Iqbal, Jason Wendler, Lucas Amenga-Etego
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2016-06-01
Series:PLoS Computational Biology
Online Access:https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1004824&type=printable
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