Advances in tumor subclone formation and mechanisms of growth and invasion

Abstract Tumor subclones refer to distinct cell populations within the same tumor that possess different genetic characteristics. They play a crucial role in understanding tumor heterogeneity, evolution, and therapeutic resistance. The formation of tumor subclones is driven by several key mechanisms...

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Main Authors: Yuhong Zhang, Weidong Wang
Format: Article
Language:English
Published: BMC 2025-04-01
Series:Journal of Translational Medicine
Subjects:
Online Access:https://doi.org/10.1186/s12967-025-06486-3
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author Yuhong Zhang
Weidong Wang
author_facet Yuhong Zhang
Weidong Wang
author_sort Yuhong Zhang
collection DOAJ
description Abstract Tumor subclones refer to distinct cell populations within the same tumor that possess different genetic characteristics. They play a crucial role in understanding tumor heterogeneity, evolution, and therapeutic resistance. The formation of tumor subclones is driven by several key mechanisms, including the inherent genetic instability of tumor cells, which facilitates the accumulation of novel mutations; selective pressures from the tumor microenvironment and therapeutic interventions, which promote the expansion of certain subclones; and epigenetic modifications, such as DNA methylation and histone modifications, which alter gene expression patterns. Major methodologies for studying tumor subclones include single-cell sequencing, liquid biopsy, and spatial transcriptomics, which provide insights into clonal architecture and dynamic evolution. Beyond their direct involvement in tumor growth and invasion, subclones significantly contribute to tumor heterogeneity, immune evasion, and treatment resistance. Thus, an in-depth investigation of tumor subclones not only aids in guiding personalized precision therapy, overcoming drug resistance, and identifying novel therapeutic targets, but also enhances our ability to predict recurrence and metastasis risks while elucidating the mechanisms underlying tumor heterogeneity. The integration of artificial intelligence, big data analytics, and multi-omics technologies is expected to further advance research in tumor subclones, paving the way for novel strategies in cancer diagnosis and treatment. This review aims to provide a comprehensive overview of tumor subclone formation mechanisms, evolutionary models, analytical methods, and clinical implications, offering insights into precision oncology and future translational research.
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spelling doaj-art-5ed8b587901e48aaad8022fa894d48bc2025-08-20T03:15:10ZengBMCJournal of Translational Medicine1479-58762025-04-0123111210.1186/s12967-025-06486-3Advances in tumor subclone formation and mechanisms of growth and invasionYuhong Zhang0Weidong Wang1Department of Oncology, Clinical Medical College, Southwest Medical UniversityDepartment of Oncology, Clinical Medical College, Southwest Medical UniversityAbstract Tumor subclones refer to distinct cell populations within the same tumor that possess different genetic characteristics. They play a crucial role in understanding tumor heterogeneity, evolution, and therapeutic resistance. The formation of tumor subclones is driven by several key mechanisms, including the inherent genetic instability of tumor cells, which facilitates the accumulation of novel mutations; selective pressures from the tumor microenvironment and therapeutic interventions, which promote the expansion of certain subclones; and epigenetic modifications, such as DNA methylation and histone modifications, which alter gene expression patterns. Major methodologies for studying tumor subclones include single-cell sequencing, liquid biopsy, and spatial transcriptomics, which provide insights into clonal architecture and dynamic evolution. Beyond their direct involvement in tumor growth and invasion, subclones significantly contribute to tumor heterogeneity, immune evasion, and treatment resistance. Thus, an in-depth investigation of tumor subclones not only aids in guiding personalized precision therapy, overcoming drug resistance, and identifying novel therapeutic targets, but also enhances our ability to predict recurrence and metastasis risks while elucidating the mechanisms underlying tumor heterogeneity. The integration of artificial intelligence, big data analytics, and multi-omics technologies is expected to further advance research in tumor subclones, paving the way for novel strategies in cancer diagnosis and treatment. This review aims to provide a comprehensive overview of tumor subclone formation mechanisms, evolutionary models, analytical methods, and clinical implications, offering insights into precision oncology and future translational research.https://doi.org/10.1186/s12967-025-06486-3Tumor subclonesClonal evolutionGenomic instabilityIntratumoral heterogeneityPhylogenetic analysisMulti-omics integration
spellingShingle Yuhong Zhang
Weidong Wang
Advances in tumor subclone formation and mechanisms of growth and invasion
Journal of Translational Medicine
Tumor subclones
Clonal evolution
Genomic instability
Intratumoral heterogeneity
Phylogenetic analysis
Multi-omics integration
title Advances in tumor subclone formation and mechanisms of growth and invasion
title_full Advances in tumor subclone formation and mechanisms of growth and invasion
title_fullStr Advances in tumor subclone formation and mechanisms of growth and invasion
title_full_unstemmed Advances in tumor subclone formation and mechanisms of growth and invasion
title_short Advances in tumor subclone formation and mechanisms of growth and invasion
title_sort advances in tumor subclone formation and mechanisms of growth and invasion
topic Tumor subclones
Clonal evolution
Genomic instability
Intratumoral heterogeneity
Phylogenetic analysis
Multi-omics integration
url https://doi.org/10.1186/s12967-025-06486-3
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AT weidongwang advancesintumorsubcloneformationandmechanismsofgrowthandinvasion