SEQSIM: A novel bioinformatics tool for comparisons of promoter regions—a case study of calcium binding protein spermatid associated 1 (CABS1)

SEQSIM: A novel bioinformatics tool for comparisons of promoter regions—a case study of calcium binding protein spermatid associated 1 (CABS1)

Abstract Background Understanding transcriptional regulation requires an in-depth analysis of promoter regions, which house vital cis-regulatory elements such as core promoters, enhancers, and silencers. Despite the significance of these regions, genome-wide characterization remains a challenge due...

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Bibliographic Details
Main Authors: Joy Ramielle L. Santos, Weijie Sun, A. Dean Befus, Marcelo Marcet-Palacios
Format: Article
Language:English
Published: BMC 2025-06-01
Series:BMC Bioinformatics
Subjects:
Promoter sequence similarity
transposable elements
CABS1 gene regulation
chromatin architecture
SEQSIM algorithm
Online Access:https://doi.org/10.1186/s12859-025-06160-x
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https://doi.org/10.1186/s12859-025-06160-x

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