A ribodepletion and tagging protocol to multiplex samples for RNA-seq based virus detection: application to the cassava virome

Abstract Background Cassava (Manihot esculenta, Crantz), is a staple food and the main source of calories for many populations in Africa, but the plant is beset by several damaging viruses. So far, eight families of virus infecting cassava have been identified; the Geminiviridae (ssDNA viruses respo...

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Bibliographic Details
Main Authors: Daniel H. Otron, Justin S. Pita, Murielle Hoareau, Fidèle Tiendrébéogo, Jean-Michel Lett, Pierre Lefeuvre
Format: Article
Language:English
Published: BMC 2025-02-01
Series:Virology Journal
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Online Access:https://doi.org/10.1186/s12985-025-02634-9
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