Plaseval: a framework for comparing and evaluating plasmid detection tools

Abstract Background Plasmids play a major role in the transfer of antimicrobial resistance (AMR) genes among bacteria via horizontal gene transfer. The identification of plasmids in short-read assemblies is a challenging problem and a very active research area. Plasmid binning aims at detecting, in...

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Bibliographic Details
Main Authors: Aniket Mane, Haley Sanderson, Aaron P. White, Rahat Zaheer, Robert Beiko, Cédric Chauve
Format: Article
Language:English
Published: BMC 2024-11-01
Series:BMC Bioinformatics
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Online Access:https://doi.org/10.1186/s12859-024-05941-0
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