The backpack quotient filter: A dynamic and space-efficient data structure for querying k-mers with abundance

Summary: Genomic data sequencing is crucial for understanding biological systems. As genomic databases like the European Nucleotide Archive expand exponentially, efficient data manipulation is essential. A key challenge is querying these databases to determine the presence or absence of specific seq...

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Bibliographic Details
Main Authors: Victor Levallois, Francesco Andreace, Bertrand Le Gal, Yoann Dufresne, Pierre Peterlongo
Format: Article
Language:English
Published: Elsevier 2024-12-01
Series:iScience
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Online Access:http://www.sciencedirect.com/science/article/pii/S2589004224026609
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