Engineering of photo-inducible binary interaction tools for biomedical applications

Abstract The ssrA-sspB dimerization system, derived from the bacterial degradation machinery, comprises a 7-residue ssrA peptide and its binding partner sspB. The compact size of ssrA makes it ideal for insertion into proteins of interest to manipulate host protein function by engineered light-respo...

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Main Authors: Yi-Tsang Lee, Lei Guo, Tien-Hung Lan, Tatsuki Nonomura, Gan Liu, Guolin Ma, Rui Wang, Yun Huang, Yubin Zhou
Format: Article
Language:English
Published: Nature Portfolio 2025-07-01
Series:Nature Communications
Online Access:https://doi.org/10.1038/s41467-025-61710-4
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author Yi-Tsang Lee
Lei Guo
Tien-Hung Lan
Tatsuki Nonomura
Gan Liu
Guolin Ma
Rui Wang
Yun Huang
Yubin Zhou
author_facet Yi-Tsang Lee
Lei Guo
Tien-Hung Lan
Tatsuki Nonomura
Gan Liu
Guolin Ma
Rui Wang
Yun Huang
Yubin Zhou
author_sort Yi-Tsang Lee
collection DOAJ
description Abstract The ssrA-sspB dimerization system, derived from the bacterial degradation machinery, comprises a 7-residue ssrA peptide and its binding partner sspB. The compact size of ssrA makes it ideal for insertion into proteins of interest to manipulate host protein function by engineered light-responsive sspB. In contrast to the LOV2 caging strategy employed to develop optical dimerizers, we present herein two distinct photo-inducible binary interaction tools (PhoBITs) systems: PhoBIT1, a light-OFF switch generated by integrating LOV2 into sspB, and PhoBIT2, a light-ON switch building upon an evolved ssrA/CRY2-sspB pair with minimal basal interaction. These tools enable mechanistic dissection and optogenetic modulation of GPCRs, ion channels, necroptosis, and innate immune signaling. When incorporated into a monobody, PhoBIT2 allows photo-switchable inhibition of an oncogenic fusion protein to curtail leukemogenesis in vivo. Collectively, through targeted ssrA insertions, PhoBITs offer versatile control over diverse protein functions, thereby expanding possibilities for optogenetic engineering and potential therapeutic applications.
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spelling doaj-art-47eaa1874e224e8e8b5cc327403957652025-08-20T03:43:14ZengNature PortfolioNature Communications2041-17232025-07-0116111810.1038/s41467-025-61710-4Engineering of photo-inducible binary interaction tools for biomedical applicationsYi-Tsang Lee0Lei Guo1Tien-Hung Lan2Tatsuki Nonomura3Gan Liu4Guolin Ma5Rui Wang6Yun Huang7Yubin Zhou8Center for Translational Cancer Research, Institute of Biosciences and Technology, Texas A&M UniversityCenter for Epigenetics and Disease Prevention, Institute of Biosciences and Technology, Texas A&M UniversityCenter for Translational Cancer Research, Institute of Biosciences and Technology, Texas A&M UniversityCenter for Translational Cancer Research, Institute of Biosciences and Technology, Texas A&M UniversityCenter for Translational Cancer Research, Institute of Biosciences and Technology, Texas A&M UniversityCenter for Translational Cancer Research, Institute of Biosciences and Technology, Texas A&M UniversityCenter for Translational Cancer Research, Institute of Biosciences and Technology, Texas A&M UniversityCenter for Epigenetics and Disease Prevention, Institute of Biosciences and Technology, Texas A&M UniversityCenter for Translational Cancer Research, Institute of Biosciences and Technology, Texas A&M UniversityAbstract The ssrA-sspB dimerization system, derived from the bacterial degradation machinery, comprises a 7-residue ssrA peptide and its binding partner sspB. The compact size of ssrA makes it ideal for insertion into proteins of interest to manipulate host protein function by engineered light-responsive sspB. In contrast to the LOV2 caging strategy employed to develop optical dimerizers, we present herein two distinct photo-inducible binary interaction tools (PhoBITs) systems: PhoBIT1, a light-OFF switch generated by integrating LOV2 into sspB, and PhoBIT2, a light-ON switch building upon an evolved ssrA/CRY2-sspB pair with minimal basal interaction. These tools enable mechanistic dissection and optogenetic modulation of GPCRs, ion channels, necroptosis, and innate immune signaling. When incorporated into a monobody, PhoBIT2 allows photo-switchable inhibition of an oncogenic fusion protein to curtail leukemogenesis in vivo. Collectively, through targeted ssrA insertions, PhoBITs offer versatile control over diverse protein functions, thereby expanding possibilities for optogenetic engineering and potential therapeutic applications.https://doi.org/10.1038/s41467-025-61710-4
spellingShingle Yi-Tsang Lee
Lei Guo
Tien-Hung Lan
Tatsuki Nonomura
Gan Liu
Guolin Ma
Rui Wang
Yun Huang
Yubin Zhou
Engineering of photo-inducible binary interaction tools for biomedical applications
Nature Communications
title Engineering of photo-inducible binary interaction tools for biomedical applications
title_full Engineering of photo-inducible binary interaction tools for biomedical applications
title_fullStr Engineering of photo-inducible binary interaction tools for biomedical applications
title_full_unstemmed Engineering of photo-inducible binary interaction tools for biomedical applications
title_short Engineering of photo-inducible binary interaction tools for biomedical applications
title_sort engineering of photo inducible binary interaction tools for biomedical applications
url https://doi.org/10.1038/s41467-025-61710-4
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