Deep Gaussian process with uncertainty estimation for microsatellite instability and immunotherapy response prediction from histology

Abstract Determining tumor microsatellite status has significant clinical value because tumors that are microsatellite instability-high (MSI-H) or mismatch repair deficient (dMMR) respond well to immune checkpoint inhibitors (ICIs) and oftentimes not to chemotherapeutics. We propose MSI-SEER, a deep...

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Main Authors: Sunho Park, Morgan F. Pettigrew, Yoon Jin Cha, In-Ho Kim, Minji Kim, Imon Banerjee, Isabel Barnfather, Jean R. Clemenceau, Inyeop Jang, Hyunki Kim, Younghoon Kim, Rish K. Pai, Jeong Hwan Park, N. Jewel Samadder, Kyo Young Song, Ji-Youn Sung, Jae-Ho Cheong, Jeonghyun Kang, Sung Hak Lee, Sam C. Wang, Tae Hyun Hwang
Format: Article
Language:English
Published: Nature Portfolio 2025-05-01
Series:npj Digital Medicine
Online Access:https://doi.org/10.1038/s41746-025-01580-8
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