ChIPbinner: an R package for analyzing broad histone marks binned in uniform windows from ChIP-Seq or CUT&RUN/TAG data

ChIPbinner: an R package for analyzing broad histone marks binned in uniform windows from ChIP-Seq or CUT&RUN/TAG data

Abstract Background The decreasing costs of sequencing, along with the growing understanding of epigenetic mechanisms driving diseases, have led to the increased application of chromatin immunoprecipitation (ChIP), Cleavage Under Targets & Release Using Nuclease (CUT&RUN) and Cleavage Under...

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Bibliographic Details
Main Authors: Reinnier Padilla, Eric Bareke, Bo Hu, Jacek Majewski
Format: Article
Language:English
Published: BMC 2025-03-01
Series:BMC Bioinformatics
Subjects:
Epigenetics
Histone marks
Genomics
ChIP-Seq
CUT&RUN
CUT&TAG
Online Access:https://doi.org/10.1186/s12859-025-06103-6
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https://doi.org/10.1186/s12859-025-06103-6

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