The open-closed mod-minimizer algorithm
Abstract Sampling algorithms that deterministically select a subset of $$k$$ k -mers are an important building block in bioinformatics applications. For example, they are used to index large textual collections, like DNA, and to compare sequences quickly. In such applications, a sampling algorithm i...
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| Main Authors: | , , |
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| Format: | Article |
| Language: | English |
| Published: |
BMC
2025-03-01
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| Series: | Algorithms for Molecular Biology |
| Subjects: | |
| Online Access: | https://doi.org/10.1186/s13015-025-00270-0 |
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