A computational framework for inferring species dynamics and interactions with applications in microbiota ecology

Abstract We present MBPert, a generic computational framework for inferring species interactions and predicting dynamics in time-evolving ecosystems from perturbation and time-series data. In this work, we contextualize the framework in microbial ecosystem modeling by coupling a modified generalized...

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Bibliographic Details
Main Authors: Yuanwei Xu, Georgios V. Gkoutos
Format: Article
Language:English
Published: Nature Portfolio 2025-08-01
Series:npj Systems Biology and Applications
Online Access:https://doi.org/10.1038/s41540-025-00568-0
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