UTAP2: an enhanced user-friendly transcriptome and epigenome analysis pipeline

UTAP2: an enhanced user-friendly transcriptome and epigenome analysis pipeline

Abstract Background The emergence of next-generation sequencing (NGS) marked a revolution in biological research, enabling comprehensive characterization of the transcriptome and detailed analysis of the epigenome landscape. This technology has made it possible to detect differences across cell type...

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Bibliographic Details
Main Authors: Jordana Lindner, Bareket Dassa, Noa Wigoda, Gil Stelzer, Ester Feldmesser, Jaime Prilusky, Dena Leshkowitz
Format: Article
Language:English
Published: BMC 2025-03-01
Series:BMC Bioinformatics
Subjects:
NGS (next-generation sequencing)
RNA-seq
ATAC-seq
ChIP-seq
Ribo-Seq
Differential gene expression
Online Access:https://doi.org/10.1186/s12859-025-06090-8
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https://doi.org/10.1186/s12859-025-06090-8

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