scCobra allows contrastive cell embedding learning with domain adaptation for single cell data integration and harmonization

Abstract The rapid advancement of single-cell technologies has created an urgent need for effective methods to integrate and harmonize single-cell data. Technical and biological variations across studies complicate data integration, while conventional tools often struggle with reliance on gene expre...

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Bibliographic Details
Main Authors: Bowen Zhao, Kailu Song, Dong-Qing Wei, Yi Xiong, Jun Ding
Format: Article
Language:English
Published: Nature Portfolio 2025-02-01
Series:Communications Biology
Online Access:https://doi.org/10.1038/s42003-025-07692-x
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