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Mammalian Base Excision Repair: Functional Partnership between PARP-1 and APE1 in AP-Site Repair.
Published 2015-01-01“…The BER pathway is mediated by a specialized group of proteins, some of which can be found in multiprotein complexes in cultured mouse fibroblasts. Using a DNA polymerase (pol) β immunoaffinity-capture technique to isolate such a complex, we identified five tightly associated and abundant BER factors in the complex: PARP-1, XRCC1, DNA ligase III, PNKP, and Tdp1. …”
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Nuclear Structure, Size Regulation, and Role in Cell Migration
Published 2024-12-01“…In this review, we provide an updated perspective on the structure and function of nuclear components, focusing on the linker of nucleoskeleton and cytoskeleton complex, the nuclear envelope, the nuclear lamina, and chromatin. …”
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A Key Role for NF-κB Transcription Factor c-Rel in T-Lymphocyte-Differentiation and Effector Functions
Published 2012-01-01“…The transcription factors of the Rel/NF-κB family function as key regulators of innate and adoptive immunity. …”
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p47phox: A Central Regulator of NADPH Oxidase Function and a Promising Therapeutic Target in Redox-Related Diseases
Published 2025-07-01“…Within NOX2, the essential scaffold protein p47phox plays a pivotal role in orchestrating enzyme activation and facilitating the assembly and membrane translocation of cytosolic components of the complex. Tight regulation of p47phox activity is crucial, and its disruption is linked to a number of pathological conditions. …”
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Chemical genetic inhibition of Mps1 in stable human cell lines reveals novel aspects of Mps1 function in mitosis.
Published 2010-04-01“…<h4>Background</h4>Proper execution of chromosome segregation relies on tight control of attachment of chromosomes to spindle microtubules. …”
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Protein phosphorylation networks in Baylisascaris procyonis revealed by phosphoproteomic analysis
Published 2025-07-01“…The annotated phosphoproteins were associated with various biological processes, including cytoskeletal remodeling, supramolecular complex assembly, and developmental regulation. The phosphopeptide functional enrichment revealed that B. procyonis phosphoproteins were mostly involved in the cytoskeleton cellular compartment, protein binding molecular function, and multiple biological processes, including regulating supramolecular fiber and cytoskeleton organization and assembling cellular protein-containing complexes and organelles. …”
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Circ-0000197 derived from porcine milk small extracellular vesicles promotes intestinal barrier function by sponging miR-429
Published 2025-06-01“…We systematically identified the circRNAs involved in this process and analyzed the miRNAs through which PM-sEV deliver circRNAs to regulate intestinal barrier function. Our findings revealed that PM-sEV promote the expression of the intestinal tight junction proteins ZO-1 and Occludin, both in vivo (mice) and in vitro (IPEC-J2). …”
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Comprehensive identification of cotton EPF/EPFL receptors and functional characterization of the GhEPFL1-1-GhER1 module in drought tolerance
Published 2025-07-01“…These components form co-receptor complexes that activate the MAPK signaling cascade, playing critical roles in stomatal development, stress responses, and signal transduction. …”
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Advances in ERECTA Family Regulation of Female Gametophyte Development in <i>Arabidopsis thaliana</i>
Published 2025-06-01“…The female gametophyte is central to the reproductive success of flowering plants, with its development being tightly controlled by an intricate network of genes and signaling pathways. …”
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Stochastic Block-Coordinate Gradient Projection Algorithms for Submodular Maximization
Published 2018-01-01“…Moreover, we show that the proposed algorithm achieves the tight (pmin/2F⁎-ϵ) approximation guarantee after O(1/ϵ2) iterations for DR-submodular functions by choosing appropriate step sizes. …”
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Tad pili with adaptable tips mediate contact-dependent killing during bacterial predation
Published 2025-05-01“…Abstract The predatory bacterium, Myxococcus xanthus, kills its prey by contact, using a putative Tight Adherence pilus, known as the Kil system, along with a protein complex resembling the basal body a type-III secretion system, named the “needleless” T3SS*. …”
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A combination of activation and repression by a colinear Hox code controls forelimb-restricted expression of Tbx5 and reveals Hox protein specificity.
Published 2014-03-01“…Forelimb-restricted expression of Tbx5 and ultimately forelimb formation is therefore achieved through co-option of two characteristics of Hox genes; their colinear expression along the body axis and the functional specificity of different paralogs. Active complexes can be formed by Hox PG proteins present throughout the rostral-caudal LPM while restriction of Tbx5 expression is achieved by superimposing a dominant repressive (Hoxc9) complex that determines the caudal boundary of Tbx5 expression. …”
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PcG-mediated higher-order chromatin structures modulate replication programs at the Drosophila BX-C.
Published 2013-01-01“…However, the interconnection between replication timing control and PcG functions remains unknown. Using Drosophila embryonic cell lines, we find that, while presence of specific PcG complexes and underlying transcription state are not the sole determinants of cellular replication timing, PcG-mediated higher-order structures appear to dictate the timing of replication and maintenance of the silenced state. …”
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The epithelial cell adhesion molecule EpCAM is required for epithelial morphogenesis and integrity during zebrafish epiboly and skin development.
Published 2009-07-01“…On the molecular level, EVL cells of epcam mutant embryos display reduced levels of membranous Ecad, accompanied by an enrichment of tight junction proteins and a basal extension of apical junction complexes (AJCs). …”
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SMG-1 and mTORC1 act antagonistically to regulate response to injury and growth in planarians.
Published 2012-01-01“…Here we show that the planarian homolog of the phosphoinositide 3-kinase-related kinase (PIKK) family member SMG-1 and mTOR complex 1 components are required for this tight control. …”
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Trans-synaptic molecular context of NMDA receptor nanodomains
Published 2025-08-01“…Abstract Tight coordination of spatial relationships between protein complexes is required for cellular function. …”
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