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    REPrise: de novo interspersed repeat detection using inexact seeding by Atsushi Takeda, Daisuke Nonaka, Yuta Imazu, Tsukasa Fukunaga, Michiaki Hamada

    Published 2025-04-01
    “…Results In this study, we developed REPrise, a de novo interspersed repeat detection software program based on a seed-and-extension method. Although the algorithm of REPrise is similar to that of RepeatScout, which is currently the de facto standard tool, we incorporated three unique techniques into REPrise: inexact seeding, affine gap scoring and loose masking. …”
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  5. 45

    Contact Parameter Calibration for Discrete Element Potato Minituber Seed Simulation by Kai Chen, Xiang Yin, Wenpeng Ma, Chengqian Jin, Yangyang Liao

    Published 2024-12-01
    “…With the application of the response surface method and a search algorithm based on Matlab 2019, the optimal combination of seed-to-seed contact parameters, namely, the collision recovery coefficient, static friction coefficient, and rolling friction coefficient, is obtained, which are 0.500, 0.476, and 0.043, respectively. …”
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  6. 46

    Detection of sugar beet seed coating defects via deep learning by Abdullah Beyaz, Zülfi Saripinar

    Published 2025-05-01
    “…Abstract The global seed coating market is expected to experience substantial growth, increasing from a 2023 valuation of USD 2.0 billion to an estimated value of USD 3.1 billion by 2028. …”
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    Key Technologies in Intelligent Seeding Machinery for Cereals: Recent Advances and Future Perspectives by Wei Liu, Jinhao Zhou, Tengfei Zhang, Pengcheng Zhang, Mengjiao Yao, Jinhong Li, Zitong Sun, Guoxin Ma, Xinxin Chen, Jianping Hu

    Published 2024-12-01
    “…In the future, more advanced multi-algorithm and multi-sensor fusion technologies for soil property detection, optimal seeding rate decisions, seeding rates, and seed position control are likely to evolve. …”
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    Article
  9. 49

    Competitive pricing and seed node selection in a two-echelon supply chain by Mohammad Hossein Morshedin, Seyed Jafar Sadjadi, Babak Amiri, Mahdi Karimi

    Published 2024-12-01
    “…To maximize her profit, the retailer decides based on three factors: first, the leader's decision about wholesale price; second, the social network structure, which is critical for selecting the seed nodes; and third, people's valuation of the product. …”
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  10. 50

    Differentiation of Soybean Genotypes Concerning Seed Physiological Quality Using Hyperspectral Bands by Izabela Cristina de Oliveira, Dthenifer Cordeiro Santana, Victoria Toledo Romancini, Ana Carina da Silva Cândido Seron, Charline Zaratin Alves, Paulo Carteri Coradi, Carlos Antônio da Silva Júnior, Regimar Garcia dos Santos, Fábio Henrique Rojo Baio, Paulo Eduardo Teodoro, Larissa Ribeiro Teodoro

    Published 2024-12-01
    “…The data obtained were subjected to an analysis of variance and the means were compared by the Scott–Knott test at 5% probability, analyzed using R software version 4.2.3 (Auckland, New Zealand). The data on the physiological quality of the seeds of the soybean genotypes were subjected to principal component analysis (PCA) and associated with the K-means algorithm to form groups according to the similarity and distinction between the genetic materials. …”
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    FSUNet: lightweight full-scale information fusion UNet for seed coat thickness measurement by Zhikun Zhang, Qin Xu, Haojie Shi, Guangwu Zhao, Lu Gao, Tao Wang, Guosong Gu, Liangquan Jia

    Published 2024-12-01
    “…In addition, we also provide a seed coat thickness measurement algorithm that can obtain stable and accurate measurement results. …”
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  13. 53

    Application of Hyperspectral Imaging for Watermelon Seed Classification Using Deep Learning and Scoring Mechanism by Hengnian Qi, Mengbo He, Zihong Huang, Jianfang Yan, Chu Zhang

    Published 2024-01-01
    “…Subsequently, three deep learning models (LeNet, GoogLeNet, and ResNet) were used to classify 10 common watermelon seeds. …”
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  14. 54

    Optimized wavelength selection for eggplant seed vitality classification using information acquisition techniques by Bing Yang, Xuyang Liu, Dongfang Zhang, Dongfang Zhang, Xiaofei Fan, Xiaofei Fan, Bo Peng, Jun Zhang, Jun Zhang

    Published 2025-06-01
    “…In response to the need for efficient and nondestructive assessment methods, this study explores the use of hyperspectral imaging combined with advanced feature selection and classification algorithms to evaluate eggplant seed viability. Hyperspectral imaging was employed to collect spectral data from eggplant seeds, covering 360 bands within a wavelength range of 395.24–1008.20 nm. …”
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    Preliminary Research on Intelligent Baking Room Dehydration and Drying Technology for Rice Sterile Seeds by Man Luo

    Published 2022-01-01
    “…And the chattering of the sliding mode was eliminated by the adaptive integral sliding mode surface. The seeds of three rice varieties were dried, the drying dehydration rate, seed germination rate, and seed vigor were measured, and the changes of seed moisture and temperature during drying were observed. …”
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    Detection of Water Content of Watermelon Seeds Based on Hyperspectral Reflection Combined with Transmission Imaging by Siyi Ouyang, Siwei Lv, Bin Li

    Published 2025-05-01
    “…In this study, reflectance and transmittance spectral data from hyperspectral imaging were fused to improve the detection accuracy of moisture content in watermelon seeds. First, watermelon seed samples with different water content gradients were prepared by dividing all 456 selected watermelon seeds into 10 groups and drying them in a drying oven at 60 °C for 0, 3, 5, 10, 15, 20, 25, 30, 40, and 50 min. …”
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  19. 59

    Machine Learning Inference of Gene Regulatory Networks in Developing <i>Mimulus</i> Seeds by Albert Tucci, Miguel A. Flores-Vergara, Robert G. Franks

    Published 2024-11-01
    “…We deployed two GRN inference algorithms—RTP-STAR and KBoost—on three different subsets of our transcriptomic dataset. …”
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    An effective and efficient hierarchical -means clustering algorithm by Jianpeng Qi, Yanwei Yu, Lihong Wang, Jinglei Liu, Yingjie Wang

    Published 2017-08-01
    “…However, k -means often becomes sensitive due to its random seeds selecting. Motivated by this, this article proposes an optimized k -means clustering method, named k* -means, along with three optimization principles. …”
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