Genome wide association analysis of flavour related metabolites in tea germplasm [Camellia sinensis (L.) Kuntze] from Assam using a genotyping by sequencing strategy by Tashmi Konwar, Ramendra Nath Sarma, Bidyut Kumar Sarmah

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Transformer‐based representation learning and multiple‐instance learning for cancer diagnosis exclusively from raw sequencing fragments of bisulfite‐treated plasma cell‐free DNA... by Jilei Liu, Hongru Shen, Yichen Yang, Meng Yang, Qiang Zhang, Kexin Chen, Xiangchun Li

“…In addition, we distilled four sequence signatures from the raw sequencing reads that exhibited differential patterns in cancer versus control and among different cancer types. …”
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Development of an mRNA vaccine against a panel of heterologous H1N1 seasonal influenza viruses using a consensus hemagglutinin sequence by Ning Ma, Zhi-Wu Xia, Zhe-Gang Zhang, Xuan-Xuan Nian, Xue-Dan Li, Zheng Gong, Guo-Mei Zhang, Yang Le, Rong Zhou, Jia-You Zhang, Xiao-Ming Yang

“…This study developed a lipid nanoparticle-encapsulated nucleoside-modified mRNA vaccine (mRNA-LNPs) encoding a consensus full-length HA sequence (H1c) and evaluated its protective efficacy and immunogenicity through in vitro and in vivo assays. …”
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Effect of herbicide application timing and sequence on waterhemp (Amaranthus tuberculatus) and common lambsquarters (Chenopodium album) control, Enlist E3® soybean yield, and econo... by Navjot Singh, Ryan P. Miller, Thomas J. Peters, Seth L. Naeve, Debalin Sarangi

“…The objectives of this experiment were to evaluate the effect of postemergence herbicide application timing and sequence with or without a preemergence application of micro-encapsulated acetochlor on waterhemp and common lambsquarters control, soybean yield, and economic returns. …”
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Associations Between the Polymorphisms in the Coding Sequence of SLCO1B1 and Blood Lipid Levels Before and After Treatment by Atorvastatin in the Chinese Han Adults with Dyslipidem... by Chen C, Tian Y, Jia F, Feng M, Zhang G, Li Q, Zhang Y, Sun N, Hu S, Ji Z

“…This study endeavors to evaluate the relationship between polymorphisms in the coding sequence (CDS) of SLCO1B1 gene and blood lipid levels before and after atorvastatin treatment among the Chinese Han adults with dyslipidemia.Patients and Methods: A total of 165 Chinese Han adults undergoing atorvastatin therapy were enrolled in this study and followed up quarterly. …”
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Clinical value of metagenomic next-generation sequencing in screening oropharyngeal colonization in patients undergoing allogeneic hematopoietic stem cell transplantation: a prospe... by Yuqi Zhang, Jianrong Ge, Yuhang Wang, Zaixiang Tang, Xiao Ma, JIsheng Liu, Depei Wu, Xiaojin Wu

“…Although metagenomic next-generation sequencing (mNGS) has played an important role in the diagnosis of complex and challenging infections, its effectiveness in screening oropharyngeal colonization is not yet fully assessed. …”
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Single-Cell RNA Sequencing, Cell Communication, and Network Pharmacology Reveal the Potential Mechanism of <i>Senecio scandens</i> Buch.-Ham in Hepatocellular Carcinoma Inhibition by Jiayi Jiang, Haitao Wu, Xikun Jiang, Qing Ou, Zhanpeng Gan, Fangfang Han, Yongming Cai

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A novel barcoded nanopore sequencing workflow of high-quality, full-length bacterial 16S amplicons for taxonomic annotation of bacterial isolates and complex microbial communities by Julian Dommann, Jakob Kerbl-Knapp, Diana Albertos Torres, Adrian Egli, Jennifer Keiser, Pierre H. H. Schneeberger

“…ABSTRACT Due to recent improvements, Nanopore sequencing has become a promising method for experiments relying on amplicon sequencing. …”
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Rapid detection of rifampin resistance in Mycobacterium tuberculosis using nucleotide MALDI-TOF MS: a comparative study with phenotypic drug susceptibility testing and DNA sequenci... by Junxian Zhang, Haiyan Zhang, Jie Wang, Wenna Sun, Yan Liang, Yourong Yang, Qingwei Ma, Xueqiong Wu

“…Among the 61 isolates analyzed by DNA sequencing, nucleotide MALDI-TOF MS and sequencing results were consistent for 52 of 56 RIF-resistant strains and all five RIF-sensitive strains, with an overall concordance of 93.4%. …”
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The clinical utility of bronchoalveolar lavage fluid metagenomic next-generation sequencing in immunocompromised critically ill patients with invasive pulmonary aspergillosis: a mu... by Junjie Zhao, Runxi Zhuge, Kai Guo, Jing Tang, Yong Sun, Yi Zhang, Lingmin Yuan, Canhu Qiu, Youqin Yan, Kaiyu Wang, Qin Jiang, Juan Chen, Zhidan Hua, Liyan Qiu, Honglong Fang, Jiancheng Zhuge

“…ABSTRACT The clinical utility of metagenomic next-generation sequencing (mNGS) in immunocompromised critically ill patients with invasive pulmonary aspergillosis (IPA) remains poorly studied. …”
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Connaissances à l’œuvre dans l’intervention complexe en ergonomie by Camille Jullienne, Fabien Coutarel, Marie-Pierre Poulossier, Gabin Gindro, Géraldine Rix-Lièvre

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Review of the technology used for structural characterization of the GMO genome using NGS data by Kahee Moon, Prakash Basnet, Taeyoung Um, Ik-Young Choi

“…According to CODEX standards, this characterization involves evaluating the presence of introduced genes, insertion sites, copy number, and nucleotide sequence structure. …”
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Micro-computed tomographic evaluation of single-cone obturation with three sealers by Sahar Zare, Ivy Shen, Qiang Zhu, Chul Ahn, Carolyn Primus, Takashi Komabayashi

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Multicenter Evaluation of Geometric Accuracy of MRI Protocols Used in Experimental Stroke. by Xenios Milidonis, Ross J Lennen, Maurits A Jansen, Susanne Mueller, Philipp Boehm-Sturm, William M Holmes, Emily S Sena, Malcolm R Macleod, Ian Marshall

“…The standard sequence was also used to evaluate the drift in accuracy of the worst performing scanner over a period of six months following basic gradient calibration. …”
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Unlocking the potential of Komagataeibacter europaeus FMES: A novel source of bacterial cellulose from Monascus vinegar biofilm by Siyu Liu, Jiaqi Luo, Ying Shi, Qihe Chen

“…Additionally, the BC production of strain FMES was evaluated under static conditions using different carbon sources. …”
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Expanding families: a pilot study on preconception expanded carrier screening in Bahrain by Cristina Skrypnyk, Rawan AlHarmi, Aanchal Mathur, Hussein Hifnawi AlHafnawi, Sri Hari Chandan Appikonda, Lova Satyanarayana Matsa

“…Abstract Background Preconception expanded carrier screening (ECS) is a genetic test that enables the identification of at-risk carriers of recessive disorders by screening for up to hundreds of genes. Next-generation sequencing (NGS) development has paved the way for its integration into ECS. …”
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Detection of Genes Related to Antibiotic Resistance in <i>Leptospira</i> by Santiago Pineda, Juliana María Martínez Garro, Jorge Emilio Salazar Flórez, Sergio Agudelo-Pérez, Fernando P. Monroy, Ronald Guillermo Peláez Sánchez

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Do LLMs Have ‘the Eye’ for MRI? Evaluating GPT-4o, Grok, and Gemini on Brain MRI Performance: First Evaluation of Grok in Medical Imaging and a Comparative Analysis by Alperen Sozer, Mustafa Caglar Sahin, Batuhan Sozer, Gokberk Erol, Ozan Yavuz Tufek, Kerem Nernekli, Zuhal Demirtas, Emrah Celtikci

“…Gemini achieved 74.54% pathology prediction and 46.38% sequence prediction accuracy. GPT-4o achieved 74.33% pathology prediction and 85.98% sequence prediction accuracy for questions that it had answered (53.50% and 61.67% in total, respectively). …”
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Cognitive Biases in Penalty Shootouts: Evaluating Fairness in ABAB and ABBA Formats by Sergio Da Silva, Raul Matsushita

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Evaluation of the anti-Salmonella Aptamer using Bioinformatic Tools and ELAA Method by Fatemeh Bozorgmehr, Mehdi Zeinoddini, Hamid Reza Rasouli Jazi

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