Performance Evaluation of a Novel Sequence-Based Directional Detection Strategy for Protection of Active Distribution Networks by Kwasi Opoku, Aleksandar Dimitrovski, Maximiliano Ferrari

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Data-Sequence Modeling Based Causal Evaluation Method for Power Systems and Spatiotemporal Causality Variation Patterns by Qi Chen, Gang Mu, Hongbo Liu, Changgang Wang

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Utility of whole exome sequencing in the evaluation of isolated fetal growth restriction in normal chromosomal microarray analysis by Xiaomei Shi, Yanling Huang, Hongke Ding, Lina Zhao, Wei He, Jing Wu

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Genetic evaluation of five patients with ROHHAD-NET using whole genome sequencing and optical genome mapping by N. van Engelen, H. M. van Santen, F. van Dijk, M. M. Kleisman, J. H.M. Merks, A. Y.N. Schouten-van Meeteren, E. J. Kamping, K. Neveling, A. Hoischen, M. C.J. Jongmans, R. P. Kuiper

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A comprehensive evaluation of plasma metagenomics sequencing for the diagnosis of suspected infection in pediatric patients with hematologic diseases by Shihai Zhang, Qiang Guo, Wei Gai, Yuxin Guo, Yafeng Zheng

“…BackgroundAs a non-invasive technology, plasma cell-free DNA (cfDNA) next-generation sequencing (mNGS) has been widely used for clinical detection of a variety of infectious diseases. …”
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Systematic evaluation of single-cell RNA-seq analyses performance based on long-read sequencing platforms by Enze Deng, Qingmei Shen, Jingna Zhang, Yaowei Fang, Lei Chang, Guanzheng Luo, Xiaoying Fan

“…Additionally, the reliability in identifying novel isoforms and allele-specific gene/isoform expression by both platforms was verified, providing a systematic evaluation to design the sequencing strategies in single-cell transcriptome studies. …”
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Evaluation of metatranscriptomic sequencing protocols to obtain full-length RNA virus genomes from mammalian tissues by Yiqiao Li, Mariana Polychronopoulou, Ine Boonen, Antonios Fikatas, Sophie Gryseels, Anne Laudisoit, Joelle Gouy de Bellocq, Bram Vrancken, Gkikas Magiorkinis, Philippe Lemey, Magda Bletsa

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magpie: A power evaluation method for differential RNA methylation analysis in N6-methyladenosine sequencing. by Zhenxing Guo, Daoyu Duan, Wen Tang, Julia Zhu, William S Bush, Liangliang Zhang, Xiaofeng Zhu, Fulai Jin, Hao Feng

“…We integrate two modules in magpie: (i) a flexible and realistic simulator module to synthesize m6A sequencing data based on real data; and (ii) a power assessment module to examine a set of comprehensive evaluation metrics.…”
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Genetic Diversity of <i>Calligonum</i> L. Species Analyzed Using Newly Developed Genomic Simple Sequence Repeats and Their Application to Conservation by Jiayi Su, Xuerong Li, Shiqing Liu, Xiyong Wang, Daoyuan Zhang, Borong Pan, Mengmeng Wei, Jancheng Wang, Wei Shi

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Evaluation of the loading capacity and patterns of packaged DNA in AAV genomes of different sizes using long-read sequencing by Mitsuki Kosaka, Ai Fujita Sajiki, Kosuke Fujita, Kazuhisa Yamada, Kenichi Kawano, Kiichi Hirazawa, Tsuyoshi Matsuno, Masahiko Takada, Nobuhiro Shimozawa, Ken-ichi Inoue, Kenya Yuki, Koji M. Nishiguchi

“…Herein, nanopore long-read sequencing was used to evaluate genomic integrity in AAV vectors harboring genomes of various sizes. …”
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168. Establishing Craniometric Data For Evaluating Micrognathia In Neonates With Pierre Robin Sequence: A Case-control Study by Sahejbir Bhatia, BS, Alexander Velazquez, BS, Kayla Prezelski, MSE, Lucas Harrison, MD, Rami Hallac, PhD, Ian Hoppe, MD, Alex Kane, MD, Paymon Sanati-Mehrizy, MD

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Evaluation of Chlamydia trachomatis Genotypes in Endocervical Specimens by Sequence Analysis of ompA Gene among Women in Tehran by Mohammadreza Rajabpour, Amir Darb Emamie, Mohammad Reza Pourmand

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Clinical evaluation of two pathogen enrichment approaches for next-generation sequencing in the diagnosis of lower respiratory tract infections by Xiao Lei, Xiumei Xu, Chao Liu, Lipeng Zhong, Shupeng Yin, Biaoxian Li, Ling Cao, Zhiting Xie, Jing Li, Xuan Zhang, Yaping Guo, Liang Zhang, Haiyan Lin, Sufeng Zhang, Chengsheng Zhang, Tian Gong

“…Therefore, direct enrichment of pathogen DNA/RNA was attempted via multiplex PCR or hybrid probe capture (targeted next-generation sequencing [tNGS]). We evaluated two enrichment methods based on multiplex PCR. …”
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Evaluation of Risk Factors and a Gene Panel as a Tool for Unexplained Infertility Diagnosis by Next-Generation Sequencing by Eglė Jašinskienė, Ieva Sniečkutė, Ignas Galminas, Lukas Žemaitis, Mantas Simutis, Marija Čaplinskienė

“…<i>Background and Objective:</i> Unexplained infertility is a major challenge in reproductive medicine and requires advanced diagnostic approaches to identify the underlying factors accurately. This study aims to evaluate the utility of risk factor analysis and a gene panel in diagnosing unexplained infertility using the next-generation sequencing (NGS) technology. …”
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ECG-based evaluation of ventricular synchrony in left bundle branch area pacing through characterization of the activation sequence by Clara Sales-Belles, Ana Mincholé, Jorge Melero-Polo, Mercedes Cabrera-Ramos, Pablo Vadillo-Martín, Isabel Montilla-Padilla, Laura Sorinas-Villanueva, Inés Julián-García, Gualber Vitto Mayo-Carlos, José Ramón Ruiz-Arroyo, Esther Pueyo, Javier Ramos-Maqueda

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Interlaboratory evaluation of high molecular weight DNA extraction methods for long-read sequencing and structural variant analysis by Alison S. Devonshire, Jordi Morata, Claire Jubin, Rui Pedro Abreu Pereira, Laura Hernandez-Hernandez, Dilek Yener, Eric Cabannes, Steven McGinn, Marc Delepine, Cédric Fund, Raúl Tonda, Simon Heath, Marc Dabad, Javier Gutierrez-Cuesta, Ignacio Sanchez Escudero, Maria Cristina Frias-Lopez, Simon Cowen, Alexandra Whale, Thorsten Voss, Jean-François Deleuze, Ivo Gut, Marta Gut, Carole A. Foy

“…Sequencing performance was evaluated and the impact of extraction method on structural variant calling investigated. …”
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Safety Evaluation of Neo Transgenic Pigs by Studying Changes in Gut Microbiota Using High-Throughput Sequencing Technology. by Qingqing Wang, Lili Qian, Shengwang Jiang, Chunbo Cai, Dezun Ma, Pengfei Gao, Hegang Li, Ke Jiang, Maoxue Tang, Jian Hou, Jie Liu, Wentao Cui

“…In this study, neo transgenic and non-transgenic piglets were randomly assigned into Group A and Group B to evaluate effects of neo transgene by studying changes in gut microbiota using high-throughput sequencing. …”
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Genome sequence and evaluation of safety and probiotic potential of Lacticaseibacillus paracasei LC86 and Lacticaseibacillus casei LC89 by Ting Chen, Yunjiao Zhao, Yunjiao Zhao, Yixuan Fan, Yao Dong, Zhonghui Gai

“…This article systematically evaluated the probiotic characteristics, whole-genome sequence analysis and safety of Lacticaseibacillus paracasei LC86 and Lacticaseibacillus casei LC89.MethodsFirstly, the two strains of lactic acid bacteria selected were identified. …”
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Clinical application and evaluation of metagenomic next-generation sequencing in pathogen detection for suspected central nervous system infections by Lei Yuan, Xin Yu Zhu, Lan Min Lai, Qiang Chen, Yang Liu, Rui Zhao

“…Abstract Central nervous system Infections (CNSIs) is a disease characterized by complex pathogens, rapid disease progression, high mortality rate and high disability rate. Here, we evaluated the clinical value of metagenomic next generation sequencing (mNGS) in the diagnosis of central nervous system infections and explored the factors affecting the results of mNGS. …”
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Research note: double digest restriction site associated DNA sequencing is a suitable alternative to high density SNP chips for genomic selection of layers by Mathilde Doublet, Lorry Bécot, Frédéric Lecerf, Sophie Allais

“…But, with an equivalent reference population, genomic evaluation based on ddRAD-seq genotypes achieves similar results as genomic evaluation based on HD SNP chip genotypes.…”
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