Evaluation of variant calling for cpn60 barcode sequence-based microbiome profiling. by Sarah J Vancuren, Scott J Dos Santos, Janet E Hill, Maternal Microbiome Legacy Project Team

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Spine magnetic resonance imaging with dynamic flexion sequences for evaluation of mini-polymyoclonus by Ronnyson Susano Grativvol, Wagner Cid Palmeira Cavalcante, Vitor Marques Caldas, Gabriela Almeida Pimentel, Carlos Otto Heise, Leonardo Guilhermino Gutierrez, Leandro Tavares Lucato, Ricardo Nitrini

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The evaluation of shotgun sequencing and rpoB metabarcoding for taxonomic profiling of bacterial communities by Karine Durand, Jean-Claude Ogier, Kiwoong Nam

“…For shotgun sequencing, the Assembly-Binning-Method and k-mer-based approaches were evaluated. …”
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Evaluation of VP4-VP2 sequencing for molecular typing of human enteroviruses. by Kouichi Kitamura, Minetaro Arita

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Evaluation of Human Telomeric G-Quadruplexes: The Influence of Overhanging Sequences on Quadruplex Stability and Folding by Viktor Viglasky, Lubos Bauer, Katarina Tluckova, Peter Javorsky

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Evaluation of non-motor symptoms in Parkinson’s disease using multiparametric MRI with the multiplex sequence by He Sui, Zhanhao Mo, Feng Shi, Qing Zhou, Dan Yu, Jiaqi Wang, Lin Liu

“…This study investigates the use of the Multi-Flip-Angle and Multi-Echo Gradient Echo Sequence (MULTIPLEX) in MRI to detect previously undetectable microstructural changes in brain tissue associated with NMS in PD.MethodsA prospective study was conducted on 37 patients diagnosed with PD. …”
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Assembly Sequence Flexibility – Assembly Precedence Matrix-Based Evaluation Model by Marco Bleckmann, Luca Mastroianni, Meret Borgerding, Peter Nyhuis

“…In addition to the traditional economic requirements, production-related factors such as assembly sequence flexibility (ASF) are increasingly important. …”
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Evaluation of targeted next-generation sequencing for microbiological diagnosis of acute lower respiratory infection by Fengzhen Yang, Lihua Jiang, Qingmei Cao, Maoli Yi, Qi Zhao

“…PurposeTo evaluate the performance of targeted next-generation sequencing (tNGS) in pathogen detection in acute lower respiratory infection.MethodsThe retrospective study was conducted between July 2023 and May 2024 at the Yantai Yuhuangding Hospital. …”
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Functionally sequenced scanpath similarity method (FuncSim): Comparing and evaluating scanpath similarity based on a task’s inherent sequence of functional (action) units by Rebecca M. Foerster, Werner X. Schneider

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Evaluating the Anticancer Potential of Ornithogalum saundersiae Saponins on Hepatocellular Carcinoma: A Transcriptome Sequencing Method by Bo XU, Ting JIANG, Wangde JIN, Xinglin JIN

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Evaluating Genome Assemblies for Optimized Completeness and Accuracy of Reference Gene Sequences in Wheat, Rye, and Triticale by Mingke Yan, Guodong Yang, Dongming Yang, Xin Zhang, Quanzhen Wang, Jinghui Gao, Chugang Mei

“…The frequency of internal stop codons could help in evaluating correctness of assemblies published in the future, and other findings are expected to support gene-related research in wheat, rye, triticale, and other closely related species.…”
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Comparative evaluation of DNA and RNA probes for capture-based mitochondrial DNA next-generation sequencing by Tianlei Sun, Shengjing Li, Yang Liu, Kaixiang Zhou, Jiamin Wang, Zhangwen Lei, Xu Guo, Jinliang Xing, Wenjie Guo

“…Conclusions The systematic evaluation of DNA and RNA probes in capture-based mtDNA NGS provides valuable insights into their performance differences. …”
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Evaluation of 16S rRNA Hypervariable Regions for Bioweapon Species Detection by Massively Parallel Sequencing by Victor H. G. Dias, Priscila da S. F. C. Gomes, Allan C. Azevedo-Martins, Bianca C. A. Cabral, August E. Woerner, Bruce Budowle, Rodrigo S. Moura-Neto, Rosane Silva

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Evaluating the efficiency of 16S-ITS-23S operon sequencing for species level resolution in microbial communities by Meghana Srinivas, Calum J. Walsh, Fiona Crispie, Orla O’Sullivan, Paul D. Cotter, Douwe van Sinderen, John G. Kenny

“…Our study addresses these gaps by evaluating the effect of primer pairs using four RRN primer combinations, and that of sequencing platforms by employing PacBio and Oxford Nanopore Technologies (ONT) systems. …”
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Evaluation of sample pooling for gene sequencing of SARS-CoV-2: a simulation study by Heng Chen, Yue Cheng, Xun He, Yuzhen Zhou, Wenjun Xie, Danyun Shen, Zhiqun He, Ruidan Li, Weixuan Liu, Liang Wang, Xuejun Zhang

“…This study evaluated pooled sequencing as a cost-effective tool for monitoring virus variants. …”
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Evaluation of the diagnostic effectiveness of next generation sequencing in sepsis etiology: a systematic review and meta-analysis by Dong Li, Yinghao Yang, Ying Xie, Jianrong Wang, Wensheng Xu, Junxue Wang, Xiaofeng Hang

“… Introduction: Systematic evaluation of the diagnostic value of next generation sequencing (NGS) in sepsis etiology. …”
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Evaluation of 16S rRNA genes sequences and genome-based analysis for identification of non-pathogenic Yersinia by Angelina A. Kislichkina, Angelika A. Sizova, Yury P. Skryabin, Svetlana V. Dentovskaya, Andrey P. Anisimov

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Evaluation of risks when choosing directions for research as scientific-technological priorities on the basis of genome-wide sequencing by L. A. Tsvetkova, F. A. Kurakov, O. V. Cherchenko

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Evaluation of synthetic mRNA with selected UTR sequences and alternative poly(A) tail, in vitro and in vivo by Ayoub Medjmedj, Hugo Genon, Dounia Hezili, Albert Ngalle Loth, Rudy Clemençon, Cyril Guimpied, Lucile Mollet, Anne Bigot, Frank Wien, Josef Hamacek, Clément Chapat, Federico Perche

“…Intending to improve the therapeutic potential of synthetic mRNA, we evaluated various UTRs and tail designs, using Pfizer-BioNTech coronavirus disease 2019 (COVID-19) vaccine sequences as a reference. …”
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Evaluating methods for identifying and quantifying Streptococcus pneumoniae co-colonization using next-generation sequencing data by Jada Hackman, Martin L. Hibberd, Todd D. Swarthout, Jason Hinds, James Ashall, Carmen Sheppard, Gerry Tonkin-Hill, Kate Gould, Comfort Brown, Jacquline Msefula, Andrew A. Mataya, Michiko Toizumi, Lay-Myint Yoshida, Neil French, Robert S. Heyderman, Stefan Flasche, Brenda Kwambana, Stéphane Hué

“…Pneumococcal DNA from culture plate sweeps were sequenced using Illumina MiSeq, and genomic serotyping was carried out using SeroCall and PneumoKITy. …”
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