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Distribution of C30 carotenoid biosynthesis genes suggests habitat adaptation function in insect-adapted and nomadic Lactobacillaceae
Published 2024-12-01“…The production of carotenoids, particularly C30 forms, has been documented in some non-photosynthetic prokaryotes. However, their function, distribution and ecology beyond photosynthesizing organisms remains understudied. …”
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The dynamics of microbial community structure and metabolic function in different parts of cigar tobacco leaves during air-curing
Published 2024-12-01“…Microbial community diversity analysis indicated that species richness and diversity were significantly higher during the fresh leaf and withering periods. Functional prediction based on PICRUSt2 suggested that the microbial communities in the middle leaves exhibited higher abundances of metabolic pathways related to carbohydrates and amino acids than those in the upper leaves, potentially leading to the formation of more flavor compounds. …”
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Complex interplay between gene deletions and the environment uncovers cellular roles for genes of unknown function in Escherichia coli
Published 2025-07-01“…In a subsequent step, we used this cross-condition data set to identify five genes of unknown function (yibN, yaaY, yfaQ, ybiJ, and yijD), of which the deletion displayed either nutrient-independent phenotypic deviations or phenotypic similarities to genes of known function. …”
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Temporal dynamics of the bacterial community structure and functions associated with marine sponges collected off Karah Island, Terengganu, Malaysia
Published 2024-12-01“…The functions “predatory or exoparasitic” and “fermentation” were highly detected in A. suberitoides, which might be related to the bacterial genera Bdellovibrio and Spirochaeta, respectively. …”
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Analysis of gastric mucosa associated microbiota in functional dyspepsia using 16S rRNA gene next-generation sequencing
Published 2025-06-01“…There is a scarcity of data regarding the presence of gastric mucosa-associated dysbiosis in functional dyspepsia. The present study aimed to characterize the taxonomy and diversities of the microbiota in the gastric mucosa of patients with functional dyspepsia. …”
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Environmental Constraints Mitigation Directly Drove the Diversifications of Fungal Community and Functional Profile in Amended Coastal Salt-Affected Soils
Published 2024-11-01“…In addition, fluctuations in the prevalence of specific fungal genera, including <i>Stachybotrys</i>, <i>Trichoderma</i>, <i>Mortierella</i>, and <i>Acremonium</i>, emerged as a decisive biotic factor influencing diversifications of fungal communities and functional profiles. …”
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Investigating the gut bacteria structure and function of hibernating bats through 16S rRNA high-throughput sequencing and culturomics
Published 2025-05-01“…These findings emphasize the need for further investigations into the functional roles of these microbiota and their contributions to host health. …”
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Comparison of the Intestinal Microbiota Composition and Function of Red Claw Crayfish (<i>Cherax quadricarinatus</i>) Cultured in Ponds and Rice Fields
Published 2024-08-01“…Tenericutes and Proteobacteria were significantly more abundant in the RB than in the PB, while Planctomycetes and Firmicutes were significantly more abundant in the PB than in the RB. …”
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Microbial and molecular signatures for enhanced gut health in pigs fed a diet with spray-dried plasma as functional protein source
Published 2025-03-01“…Overall, our results highlight the nutritional and functional value of SDP as functional dietary protein source.…”
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Metagenomic Comparison of Gut Microbes of <i>Lemur catta</i> in Captive and Semi-Free-Range Environments
Published 2025-05-01“…Environmental variations between the two rearing systems led to distinct profiles in microbial functions and carbohydrate-active enzyme gene composition. …”
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The Composition and Function of Bacterial Communities Associated with the Northern Root-Knot Nematode (<i>Meloidogyne hapla</i>) Populations Showing Parasitic Variability
Published 2025-02-01“…Results showed a variable composition (or abundance) of 65 genera in the field and 61 genera in the greenhouse isolates, with 12 genera of unknown and the rest belonging to 14 known functional groups. …”
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Potential Functions and Transmission Dynamics of Fungi Associated with <i>Anoplophora glabripennis</i> Across Different Life Stages, Between Sexes, and Between Habitats
Published 2025-03-01“…Overall, the fungi composition was stage specific, with adult gut communities being more diverse than those of larvae and eggs. Male fungal communities differed significantly, while frass and female communities were more similar to each other. …”
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The mechanism of benzene degradation in groundwater by indigenous microbial degradation from the perspectives of isotopes and microorganisms in cold regions of China
Published 2025-05-01“…This elucidates the underlying mechanism behind the changes in benzene degradation efficiency and rate as a function of concentration. The findings provide foundational information to promote the development of more effective bioremediation strategies.…”
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