Optimal Dual RNA-Seq Mapping for Accurate Pathogen Detection in Complex Eukaryotic Hosts by Infanta Eden M., Umashankar Vetrivel

“…This mapping method prevents the misalignment of pathogen reads to the host genome due to their shorter length. …”
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Mapping the Active Galactic Nucleus Effects on the Stellar and Gas Properties of NGC 5806 by Sophie L. Robbins, Sandra I. Raimundo, Matthew A. Malkan

“…It is commonly accepted that active galactic nuclei (AGNs) have a strong impact upon the evolution of their host galaxies, but the processes by which they do so are not fully understood. …”
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Toxoplasma effector MAF1 mediates recruitment of host mitochondria and impacts the host response. by Lena Pernas, Yaw Adomako-Ankomah, Anjali J Shastri, Sarah E Ewald, Moritz Treeck, Jon P Boyle, John C Boothroyd

“…Our findings suggest that association with host mitochondria may represent a novel means by which Toxoplasma tachyzoites manipulate the host. …”
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Cloud Computing Technology Algorithms Capabilities in Managing and Processing Big Data in Business Organizations: MapReduce, Hadoop, Parallel Programming by Munsif Sokiyna, Musbah J. Aqel, Omar A. Naqshbandi

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Inhibition of MEK1/2 Signaling Pathway Limits M2 Macrophage Polarization and Interferes in the Dental Socket Repair Process in Mice by Angélica Cristina Fonseca, Priscila Maria Colavite, Michelle de Campos Soriani Azevedo, Daniela Carignatto Passadori, Jessica Lima Melchiades, Rafael Carneiro Ortiz, Camila Oliveira Rodini, Ana Paula Favaro Trombone, Gustavo Pompermaier Garlet

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Risk of death during acute infection is accelerating across diverse host-pathogen systems and consistent with multiple models of host-pathogen interaction by Tim O'Sullivan, Canan Karakoç, Kristofer Wollein Waldetoft, Sam P. Brown

“…Using math models, we show that multiple processes of growth and virulence are consistent with accelerating risk of death, and we end with a discussion of critical experiments to resolve how within-host biomedical processes map onto epidemiological patterns of disease.…”
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Designing Online Workshops for Teacher Trainees: Heritage Mapping with Web GIS Story Maps by Carlos Martínez-Hernández, Radosław Piskorski, Arie Stoffelen

“…The workshops used web GIS story maps and focused on local and foreign urban heritage in Madrid and Krakow, cities that both host a UNESCO World Heritage Site. …”
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Digital solidarity and adaptation: applications developed for refugees in host countries by Özlem Özdemir, Melih Görgün, Elif Başak Sarıoğlu

“…These maps are believed to help reduce stress, make them feel safe, and facilitate the adaptation process by showing refugees the nearest shelters, dining places, hospitals, transportation, and asylum locations.…”
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Biological properties of Vibrio parahaemolyticus lytic phages and transcriptome analysis of their interactions with the host by Duanduan Chen, Zhiwei Wang, Xiangkai Li, Hongchi Du, Kaisheng Zhang, Shengliang Cao, Jianbiao Lu, Shuang Zhao, Hui Wang, Yubao Li

“…We completed an interaction map of the host bacterial and phage gene frameworks. …”
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SARS‐CoV‐2–host proteome interactions for antiviral drug discovery by Xiaonan Liu, Sini Huuskonen, Tuomo Laitinen, Taras Redchuk, Mariia Bogacheva, Kari Salokas, Ina Pöhner, Tiina Öhman, Arun Kumar Tonduru, Antti Hassinen, Lisa Gawriyski, Salla Keskitalo, Maria K Vartiainen, Vilja Pietiäinen, Antti Poso, Markku Varjosalo

“…This study applied both affinity purification mass spectrometry (AP‐MS) and the complementary proximity‐based labeling MS method (BioID‐MS) on 29 viral ORFs and 18 host proteins with potential roles in viral replication to map the interactions relevant to viral processing. …”
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Reconstructing the dynamics of HIV evolution within hosts from serial deep sequence data. by Art F Y Poon, Luke C Swenson, Evelien M Bunnik, Diana Edo-Matas, Hanneke Schuitemaker, Angélique B van 't Wout, P Richard Harrigan

“…Using phylogenetic methods to reconstruct the evolutionary dynamics of HIV within hosts enables us to discriminate between competing models of this process. …”
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Mineralogy and fluid inclusions investigation of the conglomerate-hosted Gharmorvarid occurrence, Southwest Arak, Iran by Zahra Alaminia

“…Material & MethodsAfter examining the geological map, samples were collected from the mineralized outcrops and the host rock. …”
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Differential impact of hepatitis delta virus replication and expression of viral antigens on the cellular kinome profile by Keerthihan Thiyagarajah, Mirco Glitscher, Kai-Henrik Peiffer, Eberhard Hildt

“…A hierarchical pathway map of identified deregulated kinases indicated major changes in inflammatory processes, cell cycle control and metabolic control. …”
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G protein signalling involved in host recognition and mycoparasitism-related chitinase expression in Trichoderma atroviride by Susanne Zeilinger, Barbara Reithner, Kurt Brunner, Valeria Scala, Isabel Peiβl, Matteo Lorito, Robert L Mach

“…The Tga1 G alpha subunit was shown to be involved in mycoparasitism-related processes such as chitinase expression and overproduction of toxic secondary metabolites, whereas Tga3 was found to be completely avirulent showing defects in chitinase formation and host recognition.…”
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The Massive and Quiescent Elliptical Host Galaxy of the Repeating Fast Radio Burst FRB 20240209A by T. Eftekhari, Y. Dong, W. Fong, V. Shah, S. Simha, B. C. Andersen, S. Andrew, M. Bhardwaj, T. Cassanelli, S. Chatterjee, D. A. Coulter, E. Fonseca, B. M. Gaensler, A. C. Gordon, J. W. T. Hessels, A. L. Ibik, R. C. Joseph, L. A. Kahinga, V. Kaspi, B. Kharel, C. D. Kilpatrick, A. E. Lanman, M. Lazda, C. Leung, C. Liu, L. Mas-Ribas, K. W. Masui, R. Mckinven, J. Mena-Parra, A. A. Miller, K. Nimmo, A. Pandhi, S. S. Patil, A. B. Pearlman, Z. Pleunis, J. X. Prochaska, M. Rafiei-Ravandi, M. Sammons, P. Scholz, K. Shin, K. Smith, I. Stairs

“…The discovery and localization of FRB 20240209A by the Canadian Hydrogen Intensity Mapping Fast Radio Burst (CHIME/FRB) experiment marks the first repeating FRB localized with the CHIME/FRB Outriggers and adds to the small sample of repeating FRBs with associated host galaxies. …”
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Mapping the Protein Phosphatase 1 Interactome in Human Cytomegalovirus Infection by Stefan Weinberger, Carmen Stecher, Marie-Theres Kastner, Sergei Nekhai, Christoph Steininger

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Host-Imposed Copper Poisoning Impacts Fungal Micronutrient Acquisition during Systemic Candida albicans Infections. by Joanna Mackie, Edina K Szabo, Dagmar S Urgast, Elizabeth R Ballou, Delma S Childers, Donna M MacCallum, Joerg Feldmann, Alistair J P Brown

“…Nutritional immunity is a process whereby an infected host manipulates essential micronutrients to defend against an invading pathogen. …”
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Quantitative proteomic analysis of residual host cell protein retention across adeno-associated virus affinity chromatography by Thomas M. Leibiger, Lie Min, Kelvin H. Lee

“…To better understand host cell protein (HCP) retention in adeno-associated virus (AAV) downstream processes, sequential window acquisition of all theoretical fragment ion mass spectra (SWATH-MS) was used to quantitatively profile residual HCPs for four AAV serotypes (AAV2, -5, -8, and -9) produced with HEK293 cells and purified using POROS CaptureSelect AAVX affinity chromatography. …”
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Mapping the bacterial ecology on the phyllosphere of dry and post soaked grass hay for horses. by Meriel Moore-Colyer, Annette Longland, Patricia Harris, Leo Zeef, Susan Crosthwaite

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Proteome-wide characterization of PTMs reveals host cell responses to viral infection and identifies putative antiviral drug targets by Xiaolu Li, Adam Kabza, Ashley N. Ives, Julianne Thiel, Katrina M. Waters, Wei-Jun Qian, Amy C. Sims, Tong Zhang

“…PTM regulation during virus-host interactions is complex and poorly mapped, and the development of effective PTM-targeted antiviral drugs will require a more comprehensive understanding of the cellular pathways essential for virus replication. …”
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