Structural Variations Associated with Adaptation and Coat Color in Qinghai‐Tibetan Plateau Cattle by Xiaoting Xia, Fuwen Wang, Xiaoyu Luo, Shuang Li, Yang Lyu, Yining Zheng, Zhijie Ma, Kaixing Qu, Rende Song, Jianyong Liu, Jicai Zhang, Basang Wangdui, Basang Zhuzha, Suolang Quji, Li Zhao, Silang Wangmu, Ciren Luobu, Nima Cangjue, Danzeng Luosang, Suolang Sizhu, Haijian Cheng, Ruizhe Li, Zhipeng Wu, Ruihua Dang, Yongzhen Huang, Xianyong Lan, Luohao Xu, Haifei Hu, WaiYee Low, Zhuqing Zheng, Yu Wang, Yuanpeng Gao, Lu Deng, Johannes A. Lenstra, Jianlin Han, Xueyi Yang, Wenfa Lyu, Bizhi Huang, Chuzhao Lei, Ningbo Chen

“…The results confirm the importance of SVs in evolutionary adaptation and the contribution yak‐introgressed SVs to the rapid acclimatization of QTP cattle.…”
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CT-based radiomics analysis for predicting EGFR and ALK mutational status in non‑small cell lung cancer by Ruimin He, Tengxiang Li, Li Sun, Peng Lu, Dan Sun, Rongrong Zhou, Dangchi Li, Xiaohua Yang, Zijian Zhang

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Localizing Dynamically Formed Black Hole Binaries in Milky Way Globular Clusters with LISA by Zeyuan Xuan, Kyle Kremer, Smadar Naoz

“…In this work, we use Monte Carlo N -body simulations to construct a realistic sample of Galactic clusters, thus estimating the population, detectability, and parameter measurement accuracy of BBHs hosted within them. …”
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The first complete mitochondrial genome of Eucommia ulmoides: a multi-chromosomal architecture and controversial phylogenetic relationship in asterids by Meng Li, Weijie Zhao, Jing Qiu, Changwei Bi

“…The mitogenome of E. ulmoides provided a solid foundation for comprehending the evolutionary trajectories and elucidating the underlying causes of cytonuclear discordance in E. ulmoides.…”
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PictureGuard: Enhancing Software-Defined Networking–Internet of Things Security with Novel Image-Based Authentication and Artificial Intelligence-Powered Two-Stage Intrusion Detect... by Hazem (Moh’d Said) Hatamleh, As’ad Mahmoud As’ad Alnaser, Said S. Saloum, Ahmed Sharadqeh, Jawdat S. Alkasassbeh

“…After that, authenticated user flows validation was provided by considering effective metrics utilizing the Trading-based Evolutionary Game Theory (TEGT) approach. Then, we performed a local risk assessment based on evaluated malicious flows severity and then the attack graph was constructed using an Isomorphism-based Graph Neural Network (IGNN) model. …”
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Shoreline time series analysis through the Isoradiometric method: Bridging landscape evolution and coastal management by F. Caldareri, N. Parrino, L. Balsamo, G. Dardanelli, S. Todaro, A. Sulli, A. Maltese

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Dynamics of Event Processes in the Information Society: Social Functions of Fake and Hype by S. V. Gerasimov

“…Using a fake as a triggering event to generate a hype wave can be used to construct social reality. Modeling the dynamics of event processes allows you to create a communication environment with pre-built properties, use special events as an effective tool for managing socio-cultural processes.Conclusion. …”
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Psychological and Pedagogical Bases for Determining the Future of Vocational Education: Vectors of Development by Yu. P. Zinchenko, E. M. Dorozhkin, E. F. Zeer

“…The theoretical and methodological framework of the research is based on the theory of vocational development, the concept of determining the immediate and long-term perspectives of educational sphere, as well as logical-evolutionary, system-dynamic, project-based, personal and convergent approaches. …”
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Tidal tail identification and detailed analysis of the open star cluster King 13 using Gaia DR3 and 2MASS by Nasser M. Ahmed, Mohamed S. Darwish

“…Our analysis refines the cluster’s fundamental parameters, including its structure, kinematics, and evolutionary status. To assess membership, we employed the pyUPMASK Python package with the HDBSCAN algorithm. …”
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Genomic characteristics of monkeypox virus from 8 cases in Changning District， Shanghai by HE Xiaoding, XU Yang, YIN Ning, WANG Zhenyu, GUO Jiayin

“…High-throughput sequencing was performed using Miniseq of the Illumina sequencing platform, and thereafter the sequences were concatenated and analyzed using the online analysis tool Nextclade. An evolutionary tree was constructed using the MEGA 11 software.ResultsAll 8 cases were male, with an average age of (35.76±7.00) years. …”
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Identification and expression analysis of the BnE2F/DP gene family in Brassica napus by Min Shen, Lijuan Wei, Chun Fu

“…Utilize bioinformatics approaches to identify the BnE2F/DP gene family in Brassica napus. Construct a phylogenetic tree for evolutionary relationship analysis, and analyze the chromosomal distribution, gene structure composition, types of cis-acting elements, as well as intragenomic and interspecific collinearity. …”
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Molecular characterization of Neospora caninum major antigens NcSAG1 and NcSRS2 by Soledad Echeverría, Federico Carrión, Martín Soñora, Andrés Cabrera, Carlos Robello

“…Using AlphaFold, we constructed reliable structural models, confirming conserved features such as disulfide bond patterns and dimerization. …”
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Evolution and taxonomic classification of human papillomavirus 16 (HPV16)-related variant genomes: HPV31, HPV33, HPV35, HPV52, HPV58 and HPV67. by Zigui Chen, Mark Schiffman, Rolando Herrero, Rob Desalle, Kathryn Anastos, Michel Segondy, Vikrant V Sahasrabuddhe, Patti E Gravitt, Ann W Hsing, Robert D Burk

“…Viral evolution was characterized by constructing phylogenic trees based on complete genomes using multiple algorithms. …”
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Genome-wide microsatellite characterization and their marker development and transferability in Broussonetia Species by Xiaowen Jia, Hanyu Li, Ying Han, Lu Wang, Chanjuan Lai, Xi Liu, Pan Li, Zupei Lei, Yonghua Zhang

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Advances in research on noble gas as tracers of geofluids and helium enrichment by Yu GAO, Quanyou LIU, Dongya ZHU, Xiaoqi WU, Pengpeng LI

“…BackgroundNoble gases emerge as significant tools for tracing the sources and evolutionary processes of geofluids due to their chemical inertness and different isotopic compositions across varying reservoirs. …”
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Advancing the Indian cattle pangenome: characterizing non-reference sequences in Bos indicus by Sarwar Azam, Abhisek Sahu, Naveen Kumar Pandey, Mahesh Neupane, Curtis P Van Tassell, Benjamin D Rosen, Ravi Kumar Gandham, Subha Narayan Rath, Subeer S Majumdar

“…A pangenome of Bos indicus cattle was constructed by comparing the newly assembled genomes with the reference using alignment and graph-based methods, revealing 8 Mb and 17.7 Mb of novel sequence respectively. …”
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Predicting phage-host interaction via hyperbolic Poincaré graph embedding and large-scale protein language technique by Jie Pan, Rui Wang, Wenjing Liu, Li Wang, Zhuhong You, Yuechao Li, Zhemeng Duan, Qinghua Huang, Jie Feng, Yanmei Sun, Shiwei Wang

“…First, a phage-host heterogeneous association network (PHAN) was constructed that incorporated phage-phage and host-host similarity networks. …”
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Genome-wide identification, characterization and expression pattern analysis of the VDAC gene family reveals likely roles in rapid shoot growth and abiotic stress in Moso bamboo ((... by Zhen Yu, Sijia Cai, Xueyun Xuan, Shiying Su, Jiaqi Tan, Zhijun Zhang

“…Additionally, we predicted the transcription factors that regulate VDAC-related transcripts, performed protein interaction analysis and initially constructed a VDAC-related regulatory and interaction network. …”
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Artificial chromosome reorganization reveals high plasticity of the budding and fission yeast genomes by Xueting Zhu, Shaochun Liu, Tiantian Ye, Xin Gu, Feiyu Pu, Zhen Zhou, Zhi-Jing Wu, Jin-Qiu Zhou

“…Results Using unicellular yeast models of both Saccharomyces cerevisiae and Schizosaccharomyces pombe, we deliberately construct dozens of single-chromosome strains with different chromosome architectures. …”
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Characterization and phylogenetic analysis of the complete mitochondrial genome of invasive Pontastacus leptodactylus in China by Huiyi Cai, Honglin Chen, Huan Zhou, Xiaojun Xu, Wenzhi Guan, Xuping Shentu, Bao Lou

“…These results demonstrate a close evolutionary relationship between the crayfish from Xinjiang of China and the Asian lineage. …”
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