Integrated metabolomics and transcriptomics analysis provides insights into biosynthesis and accumulation of flavonoids and glucosinolates in different radish varieties by Da Cai, Yanjie Dong, Lei Wang, Shancang Zhao

“…Herein, we comprehensively analyzed the secondary metabolite and gene expression profiles of the flesh and skin of four popular radish varieties with different flesh and/or skin colors, using UPLC-MS/MS-based metabolomics and transcriptomics approach combined with RT-qPCR. …”
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Transcriptomics-based investigation of resistance differences to swine fever between large white pigs and min pigs by Jia Li, Deming Ren, Xiangxu Meng, Yiyun He, Lixian Wang, Xihui Sheng, Ligang Wang

“…This heightened immune responsiveness could contribute to the observed differences in disease resistance between Min pigs and Large White pigs.…”
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Comparative transcriptome analysis of the effect of different heat shock periods on the unfertilized ovule in watermelon (Citrullus lanatus) by Ying-chun ZHU, De-xi SUN, Yun DENG, Guo-lin AN, Wei-hua LI, Wen-jing SI, Jun-pu LIU, Xiao-wu SUN

“…Thus, we aimed to investigate the gene expression patterns in unfertilized ovules of watermelon after different periods of heat shock by using RNA-Seq technology. …”
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Transcriptomic Profiling of ‘Candidatus Liberibacter asiaticus’ in Different Citrus Tissues Reveals Novel Insights into Huanglongbing Pathogenesis by Amelia H. Lovelace, Chunxia Wang, Amit Levy, Wenbo Ma

“…Comparative transcriptomics between seed coat, midrib, and ACP identified specific responses and metabolic states of Las in different host tissue. …”
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Comparative transcriptome analysis revealed gene expression differences in fruits between two Actinidia chinensis cultivars by Lina Guo, Kai Yan, Dan Li, Wanxing Li

“…However, the fruit transcriptome differences at the ripening stage between JD and HY are poorly understood. …”
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Comparative transcriptome analysis of oat varieties with different flowering performances under a short-day photoperiod by Man Zhang, Yuan Jiang, Haixiao Dong, Xiaohui Shan, Hao Chen, Xueying Li, Chunlong Wang, Sangpingcuo Ba, Junwei Li, Laichun Guo, Yaping Yuan, Changzhong Ren

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Comparative skin transcriptome analysis as a potential tool to investigate intra- and inter-population differences in belugas by Ebru Unal, Ebru Unal, Vijender Singh, Robert Suydam, Robert Suydam, Caroline E. C. Goertz, Tracy A. Romano, Tracy A. Romano

“…Findings from this study suggest comparative skin transcriptomics as a useful tool towards understanding biologically relevant gene expression differences at different temporal and spatial scales among beluga stocks with potential to inform and contribute to conservation and recovery of endangered beluga stocks.…”
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Comparative transcriptomes reveal insights into different host responses associated with Fusarium head blight resistance in wheat by Hao Wang, Xiaoying Yang, Tingting Li, Zuchun Li, Jianing Zhao, Zi Wang, Zhenyu Wang, Tingdong Li, Chunhuan Chen, Jixin Zhao, Changyou Wang, Xinlun Liu, Pingchuan Deng, Wanquan Ji

“…This study comparatively analyzed transcriptome data from six wheat materials with differing levels of resistance following infection by Fusarium graminearum (F. graminearum). …”
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Data-informed insights into sex differences in peripheral blood mononuclear cells from single-cell transcriptomics by Hui-Qi Qu, Joseph T. Glessner, Charlly Kao, Hakon Hakonarson

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A Comparative Transcriptomics Approach to Analyzing the Differences in Cold Resistance in Pomacea canaliculata between Guangdong and Hunan by Jing Liu, Zhiying Sun, Zhi Wang, Yuande Peng

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Metabolomics and transcriptomics indicate the changes in medicinal components of Amygdalus mongolica kernels during different developmental stages by Zhenyu Lei, Hong Chang, Li Song, Hongbing Zhou, Hongbing Zhou, Wanfu Bai, Yingchun Bai, Shuyuan Jiang, Songli Shi, Songli Shi, Jia Wang

“…A total of 104 significant differential metabolites were identified across different growth stages: the early growth stage (E), the middle growth stage (M), and the late growth stage (L). …”
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Single-Nucleus and Spatial Transcriptomics Revealing Host Response Differences Triggered by Mutated Virus in Severe Dengue by Qian Chen, Yizhen Yuan, Fangzhou Cai, Zhe Li, Qiang Wei, Wei Wang

“…Second, employing single-nucleus and spatial RNA sequencing, we analyzed and verified transcriptome samples in uninfected, mild (NGC group), and severe (N10 group) liver tissues from murine models. …”
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Transcriptomics Reveals the Differences in mRNA Expression Patterns in Yak Uterus of Follicular, Luteal, and Pregnant Phases by Shaohui Beng, Daoliang Lan, Yueyue Li, Deping Li, Yuehuan Zhang, Zelang Ma, Jianbo Zhu, Shunyang Liu, Kechao Chen, Jian Li, Peng Wang, Wei Fu

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Integrative lipidomic and transcriptomic analysis unraveled polystyrene nanoplastics-induced liver injury via oral and inhalation exposure: All roads lead to Rome? by Yiling Ge, Sheng Yang, Tianyi Zhang, Jie Li, Saisai Gong, Yifei Fang, Yuting Liang, Lihong Yin, Yuepu Pu, Zaozao Chen, Geyu Liang

“…As the primary target organ for accumulated NPs, the liver faces substantial health risks, but the differential hepatotoxic effects of different exposure routes remain unknown. In this study, a four-week exposure experiment in mice using polystyrene nanoplastics (PS-NPs) through oral and inhalation routes were conducted. …”
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Feeding Behavior, Gut Microbiota, and Transcriptome Analysis Reveal Individual Growth Differences in the Sea Urchin <i>Strongylocentrotus intermedius</i> by Qi Ye, Chuang Gao, Haoran Xiao, Shuchao Ruan, Yongjie Wang, Xiaonan Li, Yaqing Chang, Chong Zhao, Heng Wang, Bing Han, Jun Ding

Subjects: “…growth differences…”
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Transcriptome analysis of corpora lutea in domestic cats (Felis catus) reveals strong differences in gene expression of various hormones, hormone receptors and regulators across different developmental stages by Beate C. Braun, Michał M. Hryciuk, Dorina Meneghini

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Modelling the liver’s regenerative capacity across different clinical conditions by Anh Thu Nguyen-Lefebvre, Soumita Ghosh, Cristina Baciu, Bima J. Hasjim, Sara Naimimohasses, Graziano Oldani, Elisa Pasini, Michael Brudno, Nazia Selzner, Jeffrey Wrana, Mamatha Bhat

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Morphophysiological responses and gene regulation of two bermudagrass cultivars differing in response to drought stress by Jia Jiang, Along Chen, Jiayi Qi, Xiashun Liu, Qianhan Zhao, Chen Wang, Tiantian He, Xueling Zheng, Wenjing Deng, Jingbo Chen, Dandan Li, Fuchun Xie, Yajun Chen

“…In this study, we employed two different drought-tolerant bermudagrass cultivars ‘Yangjiang’ and ‘Guanzhong’ to assess the morphology, physiology and transcriptome under various drought stress conditions. …”
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Degradation of lignocellulose by different bacterial and fungal co-cultures by Julian Detain, Ludovic Besaury

“…The goal of the study was to setup inter-domain co-cultures with high capabilities of lignocellulose degradation using a pluridisciplinary approach combining bioinformatics, enzymology, transcriptomics. Different individual lignocellulolytic strains: Trichoderma reesei QM6a and three bacteria (Streptomyces coelicolor A3(2), Rhizobium sp.XylPr11 and Sphingobacterium prati AraPr2 affiliated from different phyla) were used in that study . …”
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Identification of Transcriptomic Differences in Induced Pluripotent Stem Cells and Neural Progenitors from Amyotrophic Lateral Sclerosis Patients Carrying Different Mutations: A Pilot Study by Chiara Sgromo, Martina Tosi, Cristina Olgasi, Fabiola De Marchi, Francesco Favero, Giorgia Venturin, Beatrice Piola, Alessia Cucci, Lucia Corrado, Letizia Mazzini, Sandra D’Alfonso, Antonia Follenzi

“…Importantly, the transcriptomic profiles of iPSCs and neurospheres were analyzed to highlight the differences between ALS patients and healthy controls. …”
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