Size of the Ovulatory Follicle Dictates Spatial Differences in the Oviductal Transcriptome in Cattle. by Angela María Gonella-Diaza, Sónia Cristina da Silva Andrade, Mariana Sponchiado, Guilherme Pugliesi, Fernando Silveira Mesquita, Veerle Van Hoeck, Ricardo de Francisco Strefezzi, Gustavo R Gasparin, Luiz L Coutinho, Mario Binelli

“…Ampulla and isthmus transcriptome was obtained by RNA-seq, regional gene expression was assessed by qPCR, and PGR and ERa protein distribution was evaluated by immunohistochemistry. …”
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The DNA methylome and transcriptome of different brain regions in schizophrenia and bipolar disorder. by Yun Xiao, Cynthia Camarillo, Yanyan Ping, Tania Bedard Arana, Hongying Zhao, Peter M Thompson, Chaohan Xu, Bin Brenda Su, Huihui Fan, Javier Ordonez, Li Wang, Chunxiang Mao, Yunpeng Zhang, Dianne Cruz, Michael A Escamilla, Xia Li, Chun Xu

“…Comparing with normal controls, we identified substantial differentially methylated regions (DMRs) in these two brain regions of SC and BP. To our surprise, different brain regions show completely distinct distributions of DMRs across the genomes. …”
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Transcriptomic Analysis Provides New Insights into Oocyte Growth and Maturation in Greater Amberjack (<i>Seriola dumerili</i>) by Jiahui Yang, Xiaoying Ru, Yang Huang, Jinhui Wu, Tonglin Yang, Peipei Chen, Jin Li, Kunfeng Zhu, Chunhua Zhu

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Integrative Analysis of Transcriptomics and Metabolomics Provides Insights into Meat Quality Differences in Hu Sheep with Different Carcass Performance by Xiaoxue Zhang, Liming Zhao, Huibin Tian, Zongwu Ma, Qi Zhang, Mengru Pu, Peiliang Cao, Deyin Zhang, Yukun Zhang, Yuan Zhao, Jiangbo Cheng, Quanzhong Xu, Dan Xu, Xiaobin Yang, Xiaolong Li, Weiwei Wu, Fadi Li, Weimin Wang

“…In our study, we conducted an integrative analysis of transcriptomics and metabolomics to investigate the molecular mechanisms underlying meat quality differences in Hu sheep with high (HHS, <i>n</i> = 10) and low (LHS, <i>n</i> = 10) carcass performance. …”
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Transcriptomic analysis of Streptomyces coelicolor differentiation in solid sporulating cultures: first compartmentalized and second multinucleated mycelia have different and distinctive transcriptomes. by Paula Yagüe, Antonio Rodríguez-García, María T López-García, Juan F Martín, Beatriz Rioseras, Jesús Sánchez, Angel Manteca

“…This work represents the first study of the Streptomyces MI transcriptome, analyzing how it differs from the MII transcriptome. …”
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The full-length transcriptome analysis of blueberry under different pH conditions by Cheng Liu, Xin Wei, Yuchun Yang, Youchun Liu, Xingfu Yuan, Chengguang Tao

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Transcriptomic analysis of bone transport reveals different functions between both ends by Maochun Wang, Jiao Zhang, Chongxu Qiao, Shunchao Yan, Weicheng Gao, Guoping Wu

“…Notably, 15 DEGs were shared between the TE and CE groups, with consistent expression trends, suggesting partially overlapping molecular mechanisms in bone healing under different mechanical ends.ConclusionThese findings provided insights into the distinct and shared molecular pathways involved in bone regeneration during bone transport and could inform targeted therapeutic strategies to enhance bone healing.…”
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Integrated metabolomic and transcriptomic analyses of flavonoid accumulation in different cultivars of Platostoma palustre by Jiankai You, Zhongdong Wang, Lishan Zeng, Yimeng Xia, Ying Lin, Ruoting Zhan, Guifang Zhang

“…Furthermore, real-time fluorescence qrt-PCR validation demonstrated that the expression trend of 10 DEGs was consistent with the transcriptomics data. Conclusion The phenylpropanoid pathway affects the synthesis of secondary metabolites, resulting in functional differences. …”
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Transcriptome Profiling of Different State Callus Induced from Immature Embryo in Maize by Kaiwu zhang, Dengxiang Du, Wei Wang

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Transcriptomic and Immunopathological Profiles of Inflammasomes in Different Clinical Forms of American Cutaneous Leishmaniasis by Larissa dos Santos Alcântara, Marliane Batista Campos, Ana Carolina Stocco Lima, Alessandra Pontillo, Kamilla Batista da Silva Souza, Aurea Favero Ferreira, Cristina Pires Camargo, Sueli Mieko Oba-Shinjo, Márcia Dalastra Laurenti, Carlos Eduardo Pereira Corbett, Vania L. R. da Matta, Helder Nakaya, Fernando T. Silveira, Claudia Maria de Castro Gomes

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Transcriptome Analysis Reveals Significant Differences in Gene Expression of Malignant Pheochromocytoma or Paraganglioma by Yong Joon Suh, Jung Ho Park, Sanchir-Erdene Bilegsaikhan, Dong Jin Lee

“…The TCGA and COMETE databases showed differences in mRNA expression associated with malignant and benign PC/PG. …”
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Transcriptomics and metabolomics profiling of Paris polyphylla var. yunnanensis with different growth years by Xiaoye Zhang, Jia Chen, Ping Xu, Xuan Zhang, Shuiyi Yang, Jie Zhang, Xiheng Wan, Yingsi Gao, Guowei Zheng

“…This study provides insights into the medicinal values of P. polyphylla at different growth stages and elucidates the metabolic pathways for specific steroidal saponins.…”
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Unique transcriptomic response to sepsis is observed among patients of different age groups. by Steven L Raymond, María Cecilia López, Henry V Baker, Shawn D Larson, Philip A Efron, Timothy E Sweeney, Purvesh Khatri, Lyle L Moldawer, James L Wynn

“…Overall, children manifested a greater transcriptomic intensity to sepsis as compared to the other age groups. …”
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Transcriptomic analysis of the liver, jejunum, and uterus in different production stages of laying hens by Gi Ppeum Han, Byeonghwi Lim, Jun-Mo Kim, Deok Yun Kim, Hyun Woo Kim, Dong Yong Kil

“…Thus, we compared multi-tissue transcriptome profiles across different production stages using RNA-seq to understand which overall metabolic changes occur in laying hens as the stage progresses. …”
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Characterizing differences in the muscle transcriptome between cattle with alternative LCORL-NCAPG haplotypes by Fernanda Martins Rodrigues, Leif E. Majeres, Anna C. Dilger, Joshua C. McCann, Christopher J. Cassady, Dan W. Shike, Jonathan E. Beever

“…Gene set enrichment analysis demonstrated QQ individuals had downregulation of pathways associated with adipogenesis, alongside upregulation of transcripts for cellular machinery essential for protein synthesis and energy metabolism, particularly ribosomal and mitochondrial components. Conclusions The differences in the muscle transcriptome between QQ and qq animals imply that muscle hypertrophy may be metabolically favored over accumulation of fat in animals with the QQ haplotype. …”
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Comparison of the Effect of Pruning on Plant Growth and Transcriptome Profiles in Different Tea Varieties by Shizhuo Kan, Dandan Tang, Lufang Feng, Xiaoqin Tan, Yijing Zhang, Qian Tang

“…The study offered scientific guidance for tea plant pruning suitability and preliminarily revealed the regulatory mechanism of new shoot growth in different tea plant varieties at the transcriptome level.…”
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Changes in texture and lignin during different developmental stages of mulberries and transcriptome analysis by WANG Binbin, DAI Xianglong, DU Kaiqun, SHEN Zixin, WANG Hui, GAO Yanxia

“…The adhesiveness showed no significant difference between the green berry and red berry stages, but significant differences were observed among other developmental stages. …”
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Transcriptomic analysis of maize leaves under different irrigation treatments in field conditions by Yuan-Xin Li, Ru-Zhi Li, Jing Yang, Zhi-Wei Wang, Xiao-Guang Li, Hou-Zhen Yi, Xin-Ping Guo, Hang Zhou, Kai-Hua Jia, Peng-Fei Chu

“…In this study, we designed eight different irrigation levels in a field environment, covering a wide range of gradients, and conducted a comprehensive transcriptomic analysis of maize leaves under these eight treatments. …”
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TRANSCRIPTOMIC ANALYSIS OF MELANOMA CELLS EXTRACTED FROM DIFFERENT SITES OF THE PRIMARY TUMOR by M. B. Aksenenko, A. V. Komina, N. V. Palkina, A. S. Averchuk, Yu. A. Rybnikov, Yu. A. Dyhno, T. G. Ruksha

“…Treatment of malignant tumors requires an individual approach to choose the most appropriate treatment regimen.The purpose of the study was to evaluate differences in melanoma tissue samples obtained from different parts of one patient’s primary tumor at the transcriptomic level.Material and Methods. …”
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Synergistic transcriptomic and metabolomic analyses in Zi geese ovaries with different clutch lengths by Shengjun Liu, Jiaxin Yin, Kexin Cong, Shan Yue, Yuanliang Zhang, Jinyan Sun, Xiaofang Ren, Ke Jiang, Yunuo Liu, Xiuhua Zhao

“…Transcriptomic analysis identified 424 differentially expressed genes (DEGs). …”
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