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  1. 161

    Nucleic acid-binding KH domain proteins influence a spectrum of biological pathways including as part of membrane-localized complexes by Md Kamrul Hasan, L. Jeannine Brady

    Published 2024-12-01
    “…K-Homology domain (KH domain) proteins bind single-stranded nucleic acids, influence protein–protein interactions of proteins that harbor them, and are found in all kingdoms of life. …”
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    Article
  2. 162

    Computational Investigation of Electronic Properties and Transmission Coefficient in AA-Stacked Bilayer Graphene Using the Nearest-Neighbour Tight-Binding Model by Yuki Wong, Nurul Ezaila Alias, Tian Swee Tan, Cheng Siong Lim, Michael Loong Peng Tan

    Published 2025-01-01
    “…This study employed a tailored nearest-neighbour tight-binding (NNTB) model for comprehensively investigating these electronic characteristics. …”
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    Article
  3. 163

    OnmiMHC: a machine learning solution for UCEC tumor vaccine development through enhanced peptide-MHC binding prediction by Fangfang Jian, Haihua Cai, Qushuo Chen, Xiaoyong Pan, Weiwei Feng, Ye Yuan, Ye Yuan

    Published 2025-02-01
    “…These results demonstrate the superiority of our model OnmiMHC in accurately predicting peptide-MHC binding affinities across both MHC-I and MHC-II molecules. …”
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    Article
  4. 164

    Calcium dobesilate reduces VEGF signaling by interfering with heparan sulfate binding site and protects from vascular complications in diabetic mice. by Florence Njau, Nelli Shushakova, Heiko Schenk, Vera Christine Wulfmeyer, Robin Bollin, Jan Menne, Hermann Haller

    Published 2020-01-01
    “…However, VEGF is needed at physiological concentrations to maintain glomerular integrity; complete VEGF blockade has deleterious effects on glomerular structure and function. …”
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    Article
  5. 165

    Escherichia coli proteins uL29 and ACP stabilize the Tn7-encoded TnsD and its DNA binding by Shani B. Leyva Camacho, Lindsay A. Matthews, Alba Guarné

    Published 2025-08-01
    “…In the case of the CRISPR-associated Tn7 elements from the type V-K, the ribosomal protein uS15 is an integral component of recruitment complex that promotes R-loop completion. …”
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    Article
  6. 166
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  8. 168

    Long noncoding RNA LINC00339 promotes osteoporosis development via modulating of regulator CDC42 by binding PARP1 by Dong-Li Zhu, Yan Zhang, Xiao-Yu Zhang, Zi-Han Qiu, Ke Li, Xiao-Rong Zhou, Zhen-Zhen He, Xiao-Feng Chen, Shan-Shan Dong, Wen Tian, Ya-Kang Wang, Tie-Lin Yang, Bo Yang, Yan Guo

    Published 2025-12-01
    “…Notably, integrated transcriptomic and rescue experiments revealed that LINC00339 and PARP1 coregulate CDC42 expression through post-transcriptional regulatory mechanisms. …”
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    Article
  9. 169
  10. 170

    Antiviral activity of eicosapentaenoic acid against zika virus and other enveloped viruses by Yifei Feng, Yifei Feng, Shuqi Qiu, Shuting Zou, Ru Li, Hongyu Chen, Kaitian Chen, Junbo Ma, Jinyu Liu, Xiaoyun Lai, Shuwen Liu, Shuwen Liu, Min Zou, Min Zou

    Published 2025-04-01
    “…Mechanistic experiments showed that EPA disrupted the membrane integrity of viral particles, leading to the release of viral RNA, together with the interruption of ZIKV from binding, adsorption and entry, and ultimately the inhibition of viral proliferation. …”
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    Article
  11. 171

    Effect of the recombinant amelogenin peptide TRAP on remineralization of early enamel caries: an in-situ study by Qinghua Bai, Yaru Li, Mingzhu Wen, Dandan Ma, Yiwei Li, Jinpu Chu

    Published 2025-02-01
    “…At the end of each treatment period, the percentage of surface microhardness recovery (%SHR) and the integrated change in subsurface hardness (%ΔIHC) were evaluated. …”
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    Article
  12. 172

    Correlation Analysis Between 3D and Plane DAT Binding Parameters of 11C-CFT PET/CT and the Clinical Characteristics of Patients with Parkinson’s Disease by Xiaodong Wu, Ziyuan Li, Jing Gan, Feng Wei, Ping Wu, Sheng Liang, Yufei Ma, Lin Ding, Chuantao Zuo, Zhenguo Liu, Hui Wang, Yafu Yin

    Published 2025-04-01
    “…Additionally, we sought to assess the scientific validity and feasibility of integrating 3D-dopaminergic binding parameters into the clinical scoring system for PD. …”
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    Article
  13. 173

    In silico screening by AlphaFold2 program revealed the potential binding partners of nuage-localizing proteins and piRNA-related proteins by Shinichi Kawaguchi, Xin Xu, Takashi Soga, Kenta Yamaguchi, Ryuuya Kawasaki, Ryota Shimouchi, Susumu Date, Toshie Kai

    Published 2025-04-01
    “…Furthermore, we screened the majority of Drosophila proteins (~12,000) for potential interaction with the Piwi protein, a central player in the piRNA pathway, identifying 164 pairs as potential binding partners. This in silico approach not only efficiently identifies potential interaction partners but also significantly bridges the gap by facilitating the integration of bioinformatics and experimental biology.…”
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    Article
  14. 174

    Single-cell RNA sequencing reveals the heterogeneity and regulatory modules of cell-specific RNA-binding proteins in patients with systemic lupus erythematosus by Sheng-Yan Lin, Yikai Yu, Daan Nie, Lili Yang, Yuxue Chen, Yu Chen, Cheng Wen, Zhipeng Zeng

    Published 2025-06-01
    “…Conclusion: Our multi-omics integration identifies JUN and HLA-A as central coordinators of alternative splicing programs in SLE T cells. …”
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  15. 175
  16. 176

    Identification of potential geosmin-binding proteins in grass carp gill based on affinity responsive target stability and tandem mass tag proteomics by Jun-ming Zhang, Huan Han, Bing Fu, Yi-chao Li, Kang Li, Jing-wei Liu, Er-meng Yu, Li-ping Liu

    Published 2025-02-01
    “…Its impact extends to aquatic organisms, with current research focusing on dose-response and ecotoxicity, while neglecting the molecular-level study of geosmin-binding proteins. This study employs an integrated approach combing affinity-responsive target stability in vitro, tandem mass tag proteomics in vivo, and molecular docking to identify geosmin-binding proteins in the gill tissue of grass carp (Ctenopharyngodon idella). …”
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    Article
  17. 177

    I am Once Again Asking for Your Attention: A Replication of Feature-Based Attention Modulations of Binding Effects with Picture Stimuli by Tarini Singh, Lars-Michael Schöpper, Christian Frings

    Published 2025-02-01
    “…Action control theories assume that stimulus and response features are integrated or bound into short term episodic traces. …”
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    Article
  18. 178

    A direct interaction between the RNA-binding proteins Staufen and Tm1-I/C in the oskar mRNA transport complex by Thomas Gaber, Thomas Monecke, Julia Grabowski, Bernd Simon, Tobias Williams, Vera Roman, Jeffrey Chao, Janosch Hennig, Anne Ephrussi, Dierk Niessing, Simone Heber

    Published 2025-07-01
    “…Staufen, a double-stranded RNA (dsRNA)-binding protein, has been shown to bind the oskar mRNA transport complex in the oocyte and inactivate dynein; however, it remains unclear how kinesin is activated. …”
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    Article
  19. 179

    Characterization of dsRNA binding proteins through solubility analysis identifies ZNF385A as a dsRNA homeostasis regulator by Na Jiang, Hekun Yang, Yi Lei, Weida Qin, Huifang Xiong, Kuan Chen, Kunrong Mei, Gongyu Li, Xin Mu, Ruibing Chen

    Published 2025-04-01
    “…Abstract Double-stranded RNA (dsRNA) binding proteins (dsRBPs) play crucial roles in various cellular processes, especially in the innate immune response. …”
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  20. 180

    Genome-Wide Association Study of Brown Rice Weight Identifies an RNA-Binding Protein Antagonistically Regulating Grain Weight and Panicle Number by Lin Zhou, Hong Jiang, Long Huang, Ziang Li, Zhonghao Yao, Linhan Li, Kangwei Ji, Yijie Li, Haijuan Tang, Jinping Cheng, Yongmei Bao, Ji Huang, Hongsheng Zhang, Sunlu Chen

    Published 2025-07-01
    “…Intriguingly, through integrated analysis of mutant phenotypes and haplotype variations, we demonstrated that BRW1.1 mediates the physiological tradeoff between GW and panicle number. …”
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    Article