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The homeodomain transcription factor VvOCP3 negatively regulates white rot resistance in grape
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Genome-wide determinants of proviral targeting, clonal abundance and expression in natural HTLV-1 infection.
Published 2013-03-01“…First, that binding sites for transcription factors and chromatin remodelling factors in the genome flanking the proviral integration site of HTLV-1 are associated with integration targeting, spontaneous proviral expression, and in vivo clonal abundance. …”
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Structure-guided engineering of type I-F CASTs for targeted gene insertion in human cells
Published 2025-08-01“…We recently leveraged a type I-F CRISPR-associated transposase, PseCAST, for DSB-free DNA integration in human cells, albeit at low efficiencies; multiple lines of evidence suggest DNA binding may be a bottleneck for higher efficiencies. …”
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Host cofactors and pharmacologic ligands share an essential interface in HIV-1 capsid that is lost upon disassembly.
Published 2014-10-01“…The HIV-1 capsid is involved in all infectious steps from reverse transcription to integration site selection, and is the target of multiple host cell and pharmacologic ligands. …”
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Interrogation of the protein-protein interactions between human BRCA2 BRC repeats and RAD51 reveals atomistic determinants of affinity.
Published 2011-07-01“…Our computational approaches encompass a range of techniques designed to link sequence variation with binding free energy. They include MM-PBSA and thermodynamic integration, which are based on classical force fields, and a recently developed approach to computing binding free energies from large-scale quantum mechanical first principles calculations with the linear-scaling density functional code onetep. …”
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National Minorities in the Law of the EC/EU
Published 2008-09-01“…But in the 1990s there began a process of „de-economisation of the European integration” and the importance of national minorities became higher. …”
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Biology and utilization of R2 retrotransposons
Published 2025-12-01“…Each R2 element contains a single open reading frame (ORF) encoding a multifunctional protein with nucleic acid-binding, reverse transcriptase, and endonuclease activities, enabling specific genomic integration via a mechanism called target-primed reverse transcription (TPRT). …”
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The Path to Euro Adoption: a Case Study of Slovenia and Slovakia
Published 2021-06-01“…By the terms of their treaties of accession, the financial integration and the adoption of the euro became binding on all new Member States of the European Union. …”
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Footprinting of Inhibitor Interactions of In Silico Identified Inhibitors of Trypanothione Reductase of Leishmania Parasite
Published 2012-01-01“…The method provides scope for automation and integration into the virtual screening process employing docking softwares, for clustering the small molecule inhibitors based upon protein-ligand interactions.…”
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Identification of Praziquantel derivatives to target serpin for inhibiting Schistosoma infection in human: using molecular docking and network pharmacology approach
Published 2024-12-01“…ADMET and molecular docking predict the preferred binding orientation of drug candidates, like Mol4, with target proteins. …”
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Mitochondrial transcription terminator family members mTTF and mTerf5 have opposing roles in coordination of mtDNA synthesis.
Published 2013-01-01“…We have investigated the roles in this process of the mTERF (mitochondrial transcription termination factor) family members mTTF and mTerf5 in Drosophila melanogaster. The two mTTF binding sites in Drosophila mtDNA, which also bind mTerf5, were found to coincide with major sites of replication pausing. …”
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Structure-Based Identification of Natural MTH1 Inhibitors for Breast Cancer Therapy via Molecular Docking and Dynamics Simulations
Published 2025-05-01“…This protein ensures the integrity of the nucleotide pool by preventing the integration of oxidized 2′-deoxynucleoside triphosphates (dNTPs) during DNA replication. …”
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Dishevelled-1 regulates global transcriptomic changes and associates with ETS1 transcription factor
Published 2025-07-01“…Integration of RNA-sequencing and ChIP-sequencing further revealed ETS1 as a transcription factor binding partner which targets nuclear DVL1 to specific genomic loci. …”
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