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    Revolutionizing diabetes treatment: computational insights into 4-hydroxy isoleucine derivatives and advanced molecular screening for antidiabetic compounds by Lakshmi Mounika Kelam, Manjinder Singh Gill, M. Elizabeth Sobhia

    Published 2025-04-01
    “…Conclusions: The study highlights 4HILe derivatives as promising inhibitors for diabetes-associated enzymes, demonstrating robust binding and dynamic stability. Integrating molecular dynamics, free energy calculations, and AI-driven generative modeling provides a strong framework for accelerating antidiabetic drug discovery. …”
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  3. 383

    Antibacterial and antibiofilm activity of peptide PvGBP2 against pathogenic bacteria that contaminate Auricularia auricular culture bags by Shen Yang, Zijin Yuan, Jude Juventus Aweya, Shanggui Deng, Wuyin Weng, Yueling Zhang, Guangming Liu

    Published 2022-11-01
    “…Transmission electron microscopy (TEM) revealed that PvGBP2 kills bacteria by perforating the cell wall, destroying membrane integrity and resulting in the leakage of intracellular solutes. …”
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    Integrated multi-omics analyses of molecular pathways underlying microcystin-LR toxicity in the earthworm Eisenia fetida by Xiang Liu, Wen-Hua Zhai, Rao Liu, Bai-Lin Liu, Rong-Jun Gao, Yan-Wen Li, Lei Xiang, Quan-Ying Cai, Hai-Ming Zhao, Ce-Hui Mo

    Published 2025-09-01
    “…Proteomic analysis showed that MC-LR affected distinct pathways, particularly those associated with nucleotide binding, calcium ion binding, ATP binding, cytoskeleton, and actin filament binding. …”
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    Discovery of Novel CRK12 Inhibitors for the Treatment of Human African Trypanosomiasis: An Integrated Computational and Experimental Approach by Qin Li, Jiayi Luo, Chenggong Fu, Wenqingqing Kang, Lingling Wang, Henry Tong, Zhaorong Lun, Qianqian Zhang, Dehua Lai, Huanxiang Liu

    Published 2025-05-01
    “…The top four hits, F733-0072, F733-0407, L368-0556, and L439-0038, exhibited IC<sub>50</sub> values of 1.11, 1.97, 0.85, and 1.66 µM, respectively. Binding free energy and energy decomposition analyses identified ILE335, VAL343, PHE430, ALA433, and LEU482 as hotspot residues for compound binding. …”
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  8. 388

    An integrated bioinformatics and immunoinformatics approach to design a multi-epitope-based vaccine against Langya henipavirus by Saurav Kumar Mishra, Gyan Prakash Rai, Neeraj Kumar, Asheesh Shanker, John J. Georrge

    Published 2025-05-01
    “…The 3D structure was anticipated and verified, and a docking study with toll-like receptors (TLR2, TLR3, TLR8 and TLR9) indicates significant binding with TLR3 and TLR9 based on the highest molecular interaction and high binding affinity score of − 25.2 and − 24.2 kcal mol−1. …”
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    Directed evolution and modular integration of a high-affinity ICOS-L variant for potent T cell–mediated tumor elimination by Ji Yeon Ha, Tae Wook Song, Petrina Jebamani, Sun-Gu Lee, Sang Taek Jung

    Published 2025-07-01
    “…Abstract Background Advancing cancer immunotherapy requires engineering synthetic immunomodulators that integrate precise receptor targeting, tunable activity, and compatibility with modular biologic formats. …”
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  14. 394

    Engineering a probiotic Bacillus subtilis for acetaldehyde removal: A hag locus integration to robustly express acetaldehyde dehydrogenase. by Chandler Hassan-Casarez, Valerie Ryan, Bentley M Shuster, John W K Oliver, Zachary D Abbott

    Published 2024-01-01
    “…We demonstrate constitutive gene expression in relevant conditions driven by the endogenous hag promoter, following a deletion of the gene encoding a post-translational regulator of σD, FlgM, and a point mutation to abrogate the binding of the translational inhibitor CsrA. Reporter constructs demonstrate activity at the hag locus after germination, with a steady increase in heterologous expression throughout outgrowth and vegetative growth. …”
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    HybTrans: A Molecular Generation and Optimization Model Integrating Protein Pocket Sequence and Structural Information by Chen Yinghao, Liu Hongde, Sun Xiao

    Published 2025-01-01
    “…However, there is a lack of models that integrate both protein pocket sequence and structural information for molecular generation. …”
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  18. 398

    Integrated Computational Approach to Rational Drug Design Targeting SIK2/3: From Theory to Practice by Eid Youssef Eid Rashed, Alisa Gorislav

    Published 2024-11-01
    “…This study presents a comprehensive approach to designing and optimizing small molecule inhibitors targeting Salt-Inducible Kinases 2 and 3 (SIK2 and SIK3), crucial regulators of cellular signaling pathways implicated in various diseases, including cancer, inflammation, and metabolic disorders. By integrating advanced computational methods and expert-driven chemical synthesis, we generated a diverse library of potential inhibitors and meticulously evaluated their pharmacological properties and binding affinities to SIK2. …”
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  19. 399

    Unlocking precision medicine: clinical applications of integrating health records, genetics, and immunology through artificial intelligence by Yi-Ming Chen, Tzu-Hung Hsiao, Ching-Heng Lin, Yang C. Fann

    Published 2025-02-01
    “…Abstract Artificial intelligence (AI) has emerged as a transformative force in precision medicine, revolutionizing the integration and analysis of health records, genetics, and immunology data. …”
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