RNAmigos2: accelerated structure-based RNA virtual screening with deep graph learning by Juan G. Carvajal-Patiño, Vincent Mallet, David Becerra, Luis Fernando Niño Vasquez, Carlos Oliver, Jérôme Waldispühl

“…Our model achieves a 10,000x speedup over docking while ranking active compounds in the top 2.8% on structurally distinct test sets. It is robust to binding site variations and successfully screens unseen RNA riboswitches in a 20,000-compound in-vitro microarray, with a mean enrichment factor of 2.93 at 1%. …”
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A global dataset of tree hydraulic and structural traits imputed from phylogenetic relationships by James Knighton, Pablo Sanchez-Martinez, Leander Anderegg

“…Abstract We present a dataset of plant hydraulic and structural traits imputed for 55,779 tree species based on TRY plant trait dataset observations and phylogenetic relationships. …”
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Using common spatial distributions of atoms to relate functionally divergent influenza virus N10 and N11 protein structures to functionally characterized neuraminidase structures,... by Arthur Weininger, Susan Weininger

“…The ability to identify the functional correlates of structural and sequence variation in proteins is a critical capability. …”
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Characterization of the translational shear properties of the magnetorheological elastomers embedding the tilt chain-like structure by Lin Dezhao, Gong Di, Yang Fan, Li Ruihong, Zhang Weiqiang

“…The results illustrate that compared with the isotropic MREs and anisotropic MREs with symmetrical chain-like structures, the anisotropic MREs with the tilt chain-like structure can provide more significant variations in the average storage and loss moduli with a slight effect on the zero-field viscoelastic properties, and it exhibits higher frequency and strain dependencies. …”
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Structure Optimization of Mixed-Speed Train Traffic for Cyclic Timetable: Model and Algorithm Development by Jiamin Zhang, Jiarui Zhang

“…By integrating sequencing issue with headway time together, this paper studies the structure optimization of mixed-speed train traffic for a cyclic timetable. …”
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Numerical solution of a spatio-temporal gender-structured model for hantavirus infection in rodents by Raimund BÜrger, Gerardo Chowell, Elvis GavilÁn, Pep Mulet, Luis M. Villada

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Structure-Based Deep Learning Framework for Modeling Human–Gut Bacterial Protein Interactions by Despoina P. Kiouri, Georgios C. Batsis, Christos T. Chasapis

“…<b>Methods:</b> This study presents a deep learning-based framework for predicting PPIs between human and gut bacterial proteins using structural data. The framework leverages graph-based protein representations and variational autoencoders (VAEs) to extract structural embeddings from protein graphs, which are then fused through a Bi-directional Cross-Attention module to predict interactions. …”
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Structural and optical properties of temperature-controlled vanadium nitride thin films deposited by MOCVD by Olakunle Abiodun Akinwumi, Kayode Oladele Olumurewa, Adetokunbo Temitope Famojuro, Olumide Oluwole Akinwunmi

“…The resulting thin films were characterized using Scanning Electron Microscopy (SEM), X-Ray Diffraction (XRD), Fourier Transform Infrared Spectroscopy (FTIR), and UV-Visible Spectrophotometry to assess their structural and optical attributes. SEM revealed temperature-dependent variations in surface morphology, with nanostructured features becoming more defined at higher temperatures. …”
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Application of schmidt hammer and ultrasonic pulse velocity for structural integrity assessment in water dams by Wilson M. Kairu, Siphila W. Mumenya, Kenneth D. Njoroge, Ian M. Kaniu

“…Abstract This study investigates the integration of Schmidt Hammer Rebound Numbers and Ultrasonic Pulse Velocity (UPV) measurements to estimate the compressive strength of reinforced concrete in water dam structures. Unlike previous studies that rely solely on controlled laboratory correlations, this work uniquely incorporates core samples extracted from critical dam components—including spillways, culverts, sedimentation tanks, and stilling basins—to address variations arising from in-situ conditions. …”
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SIZE STRUCTURE IN SETTLEMENTS OF MUSSEL CRENOMYTILUS GRAYANUS AT THE COAST OF PRIMORSKY KRAI (JAPAN SEA) by L. G. Sedova, D. A. Sokolenko

“…Current size structure of mussel Crenomytilus grayanus in the coastal waters at Primorye (Japan Sea) is considered on results of diving surveys conducted in 2003–2018. …”
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The rhetorical structure of newspaper reports: A synergy between corpus, genre and discourse analysis by Hafizah Hajimia, Nur Rasyidah Mohd Nordin, Manvender Kaur Sarjit Singh, Philip Golingai

“…The findings identified a nine-move structure for the newspaper reports. The nine-move structure consists of five optional moves and four obligatory moves. …”
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Trajectory Planning for Autonomous Cars in Low-Structured and Unstructured Environments: A Systematic Review by Cristiano Souza de Oliveira, Rafael De S. Toledo, Vitor H. Tulux Oliveira Victorio, Aldo von Wangenheim

“…In particular, we highlight the strengths and weaknesses of the local planning approaches and discuss and identify common limitations, such as sensor faults, terrain variations, safety and regulatory risks. Moreover, we summarize the most adopted visual input sensors, their associated data structures that are used as search spaces for local planning, and sensor fusion techniques, which complement the advantages of different types of sensors. …”
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The Physicochemical Properties and Structure of Mung Bean Starch Fermented by <i>Lactobacillus plantarum</i> by Zhen Huang, Yisi Li, Tian Guo, Li Xu, Jieyao Yuan, Zuyin Li, Cuiping Yi

“…Understanding the relationship between gel formation and the hierarchical structure of mung bean starch fermented by <i>Lactobacillus plantarum</i> has potential value for its green modification and quality improvement. …”
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Simulation of electron transfer processes in a semiconductor structure using graphene and boron nitride by V. V. Muravyov, V. N. Mishchenka

“…Electron transfer processes were simulated considering temperature variations of graphene and boron nitride layers, which is observed with increasing strength of the electric field in the structure. …”
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Synthesis, structural and functional characterization of ultrasonic-assisted OSA modified tamarind seed gum by Adan Naeem, Rizwana Batool, Aysha Sameen, Saima Tehseen, Muhammad Faisal Manzoor, Rana Muhammad Aadil

“…The modified gums were characterized based on their structural and physicochemical properties. The degree of substitution indicated that ultrasonic treatment enhanced the OSA chemical reactivity toward the gum. …”
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Numerical Simulation of Stress Wave Propagation in the Three-Layer Medium Structure of Standing Trees by Yingchun Gong, Jialei Qu, Haiqing Ren, Shubing Chen, Fenglu Liu

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The Effect of Ontogenetic Dietary Shifts on the Trophic Structure of Fish Communities Based on the Trophic Spectrum by Junwei Xu, Jie Yin, Binduo Xu, Chongliang Zhang, Yupeng Ji, Yiping Ren, Ying Xue

“…The trophic spectrum provides a useful method to investigate the trophic structure of fish communities. However, ontogenetic shifts in diet can cause variations in the trophic level with body size, thereby influencing the trophic structure of fish communities. …”
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Local knowledge on population structure and conservation of Lannea species in Burkina Faso (West Africa) by Soumaїla Savadogo, Blandine Marie Ivette Nacoulma, Anne Mette Lykke, Larba Hubert Balima, Adjima Thiombiano

“…Data were collected through semi-structured interviews with 576 informants in 16 localities across the Sudanian and the Sudano-Sahelian climatic zones of Burkina Faso. …”
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Seasonal Fluctuations and Vertical Heterogeneity of Biochemical–Structural Parameters in Wetland Emergent Aquatic Vegetation by Huaijing Wang, Yunmei Li, Jianguang Wen, Gaolun Wang, Huaiqing Liu, Heng Lyu

“…This study evaluated the structural characteristics of vegetation communities and the regulation of direct solar radiation variations within the canopy across seasons of Phragmites australis (P. australis) and Typha orientalis (T. orientalis), 2 typical emergent aquatic vegetations (EAVs), based on radiative transfer theory. …”
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Development of a Frequency-Adjustable Tuned Mass Damper (FATMD) for Structural Vibration Control by Huaguo Gao, Congbao Wang, Chen Huang, Wenlong Shi, Linsheng Huo

“…The tuned mass damper (TMD) can be applied to suppress earthquake, wind, and pedestrian- and machine-induced vibration in factory buildings or large span structures. However, the traditional TMD with a fixed frequency will not be able to perform effectively against the frequency variations in multiple hazards. …”
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