Whole-Genome Sequencing of Mexican Strains of Anaplasma marginale: An Approach to the Causal Agent of Bovine Anaplasmosis by Fernando Martínez-Ocampo, Rosa Estela Quiroz-Castañeda, Itzel Amaro-Estrada, Edgar Dantán-González, Jesús Francisco Preciado de la Torre, Sergio Rodríguez-Camarillo

“…International Journal of Genomics…”
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Detailed genetic analyses highlight genetic variation and genomic regions for lead tolerance in spring wheat by Amira M. I. Mourad, Amira M. I. Mourad, Ahmed Sallam, Ahmed Sallam, Khaled A. Farghaly, Andreas Börner

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Engineered CRISPR-Cas9 for Streptomyces sp. genome editing to improve specialized metabolite production by Duck Gyun Kim, Boncheol Gu, Yujin Cha, Jeonghan Ha, Yongjae Lee, Gahyeon Kim, Byung-Kwan Cho, Min-Kyu Oh

“…Abstract The CRISPR-Cas9 system has frequently been used for genome editing in Streptomyces; however, cytotoxicity, caused by off-target cleavage, limits its application. …”
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Genome-wide identification, characterization, and expression analysis of BZR transcription factor family in Gerbera hybrida by Qishan Luo, Gan Huang, Xiaohui Lin, Xiaojing Wang, Yaqin Wang

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Genome-Wide DNA Methylation in Mixed Ancestry Individuals with Diabetes and Prediabetes from South Africa by Tandi E. Matsha, Carmen Pheiffer, Stephen E. Humphries, Junaid Gamieldien, Rajiv T. Erasmus, Andre P. Kengne

“…Aims. To conduct a genome-wide DNA methylation in individuals with type 2 diabetes, individuals with prediabetes, and control mixed ancestry individuals from South Africa. …”
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Effectiveness of ISSR markers for detecting genomic variability in <I>Panicum miliaceum</I> L. accessions by D. Kh. Arkhestova, A. A. Yakhutlova, A. D. Khaudov, L. Kh. Sokurova, T. V. Kulemina

“…It was shown that four ISSR markers with the best informativeness values provided sufficient polymorphism to assess the genetic diversity of the analyzed P. miliaceum genotypes and could be recommended for identification of the variability in the genome of millet accessions.…”
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Comparative Genomic In Situ Hybridization and the Possible Role of Retroelements in the Karyotypic Evolution of Three Akodontini Species by Naiara Pereira Araújo, Gustavo Campos Silva Kuhn, Flávia Nunes Vieira, Thaís Queiroz Morcatty, Adriano Pereira Paglia, Marta Svartman

“…International Journal of Genomics…”
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Genomic Insights Into Red Squirrels in Scotland Reveal Loss of Heterozygosity Associated With Extreme Founder Effects by Melissa M. Marr, Emily Humble, Peter W. W. Lurz, Liam A. Wilson, Elspeth Milne, Katie M. Beckmann, Jeffrey Schoenebeck, Uva‐Yu‐Yan Fung, Andrew C. Kitchener, Kenny Kortland, Colin Edwards, Rob Ogden

Subjects: “…conservation genomics…”
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Ongoing measles outbreak in Romania: Clinical investigation and molecular epidemiology performed on whole genome sequences by Robert Hohan, Marius Surleac, Victor Daniel Miron, Andreea Tudor, Ana-Maria Tudor, Oana Săndulescu, Ovidiu Vlaicu, Victoria Aramă, Daniela Pițigoi, Adriana Hristea, Anca Cristina Drăgănescu, Dimitrios Paraskevis, Leontina Bănică, Dan Oțelea, Simona Paraschiv

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Computational protocol for analyzing whole-genome sequencing data from Staphylococcus aureus clinical isolates by Miquel Sánchez-Osuna, Ivan Erill, Oriol Gasch, Oscar Q. Pich

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Genomic strategies to facilitate breeding for increased β-Glucan content in oat (Avena sativa L.) by Sumandeep Kaur Bazzer, Guilherme Oliveira, Jason D. Fiedler, Raja Sekhar Nandety, Jean-Luc Jannink, Melanie Caffe

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Whole genome sequence of MUM116, a Bacillus species isolated from intertidal soil by Hooi-Leng Ser, Wen-Si Tan, Wai-Fong Yin, Kok-Gan Chan, Vengadesh Letchumanan

“…In order to obtain better understanding of the strain, the genome sequence of MUM 116 was acquired through Illumina MiSeq sequencing platform and yielded 5,720,395 bp along with 165 tRNA and 25 rRNA genes. …”
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Black fungi and ants: a genomic comparison of species inhabiting carton nests versus domatia by Yu Quan, Nickolas Menezes da Silva, Bruna Jacomel Favoreto de Souza Lima, Sybren de Hoog, Vania Aparecida Vicente, Veronika Mayer, Yingqian Kang, Dongmei Shi

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Genomic and resistome analysis of Salmonella enterica isolates from retail markets in Yichun city, China by Xiaowu Jiang, Abubakar Siddique, Li Chen, Lexin Zhu, Haiyang Zhou, Li Na, Chenghao Jia, Yan Li, Min Yue

“…The overall incidence of Salmonella was 9.4 %, with a higher contamination rate observed in pork at 13.5 %, followed by the retail environment at 7.69 %. The genomic analysis of the isolates revealed a total of fifteen distinct serovars, with serovar Enteritidis being the most prevalent (64.3 %). …”
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Recently Delisted Songbird Harbors Extensive Genomic Evidence of Inbreeding, Potentially Complicating Future Recovery by Anna María Calderón, Andrew W. Wood, Zachary A. Szpiech, David P. L. Toews

Subjects: “…conservation genomics…”
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Whole genome sequencing of a novel carrageenan-degrading bacterium Photobacterium rosenbergii and oligosaccharide preparation by Jing Chen, Jing Chen, Runmin Chen, Kit-Leong Cheong, Zhuo Wang, Rui Li, Xuejing Jia, Qiaoli Zhao, Xiaofei Liu, Bingbing Song, Saiyi Zhong, Saiyi Zhong

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Fast and accurate deep learning scans for signatures of natural selection in genomes using FASTER-NN by Sjoerd van den Belt, Nikolaos Alachiotis

“…It has higher sensitivity than state-of-the-art CNN classifiers while only processing allele frequencies and genomic positions through dilated convolutions to maximize data reuse. …”
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Genome analysis and prevalence of SARS-CoV-2 Indonesian variants and the correlation with the outbreak timeline by Maria Prevyolita Indra Muliawan, Timotius Christopher Tantokusumo, Amalda Siti Anisa, Kholis Abdurachim Audah

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Complete Genome Sequence of the Plant Growth-Promoting Bacterium Hartmannibacter diazotrophicus Strain E19T by Christian Suarez, Stefan Ratering, Torsten Hain, Moritz Fritzenwanker, Alexander Goesmann, Jochen Blom, Trinad Chakraborty, Boyke Bunk, Cathrin Spröer, Jörg Overmann, Sylvia Schnell

“…International Journal of Genomics…”
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PathoGD: an integrative genomics approach to primer and guide RNA design for CRISPR-based diagnostics by Soo Jen Low, Matthew O’Neill, William J. Kerry, Natasha Wild, Marcelina Krysiak, Yi Nong, Francesca Azzato, Eileen Hor, Lewis Williams, George Taiaroa, Eike Steinig, Shivani Pasricha, Deborah A. Williamson

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