A Flesh Fly Sarcophaga crassipalpis Macquart (Insecta: Diptera: Sarcophagidae) by Lazaro A. Diaz, Phillip E. Kaufman

“…Sarcophaga crassipalpis is commonly used in laboratories to study gene expression, diapause processes, and physiological processes. …”
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Metabolomic and Transcriptomic Analysis of the Mechanism of the Apple Coloration Change After Uncovering Fruit Bag by Pengwei Duan, Xiaojian Ma, Haiqiang Shi, Lizhe Qin, Jizhuang Du, Sumiao Yang, Jianjun Zhang

“…In this study, the pattern of metabolite accumulation and gene expression was profiled in the striped and blushed apple peels at three ripening periods to elucidate the color formation mechanism within two weeks after removing the bag. …”
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An improved method for whole-mount in situ hybridization in regenerating tails of Xenopus laevis tadpoles by A. D. Shitikov, E. A. Parshina, A. G. Zaraisky, A. G. Zaraisky, M. B. Tereshina, M. B. Tereshina

“…Whole-mount in situ hybridization (WISH) is a widely used method that supports the concept of “seeing is believing” by enabling the visualization of gene expression patterns in whole-mount multicellular samples or sections. …”
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Network Pharmacology Approaches Used to Identify Therapeutic Molecules for Chronic Venous Disease Based on Potential miRNA Biomarkers by Oscar Salvador Barrera-Vázquez, Juan Luis Escobar-Ramírez, Gil Alfonso Magos-Guerrero

“…The modulation of gene expression through microRNA (miRNA) partly regulated the development of cardiovascular disease (CVD). …”
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Early Reciprocal Effects in a Murine Model of Traumatic Brain Injury and Femoral Fracture by Katharina Ritter, Kirsten Jung, Christopher Dolderer, Dominik Appel, Christine C. Oswald, Ulrike Ritz, Michael K. E. Schäfer

“…Taken together, using a murine model of TBI and femoral fracture, we report early reciprocal impairments of brain tissue maintenance, behavioral recovery, and bone repair gene expression. Increased circulating levels of the biomarkers osteopontin and progranulin indicate ongoing tissue inflammation and repair. …”
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Assessment of the Vanillin Anti-Inflammatory and Regenerative Potentials in Inflamed Primary Human Gingival Fibroblast by Erica Costantini, Bruna Sinjari, Katia Falasca, Marcella Reale, Sergio Caputi, Srinivas Jagarlapodii, Giovanna Murmura

“…After 24 hours of treatments, the gene expression and production of IL-6, TNF-α, IL-8, COX-2, iNOS, and nitric oxide (NO) generation and the wound healing rate were determined. …”
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Post-translational histone modifications associated with the development of metabolic dysfunction-associated fatty liver disease. Part 1. General provisions by O.E. Abaturov, A.O. Nikulina

“…The authors emphasize that post-translational histone modifications regulate the activity of gene expression, and each of these types differently changes the structure of chromatin and, as a result, gene expression. …”
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Comparison of heart rate variability, hemodynamic, metabolic and inflammatory parameters in various phases of decompansatory hemorrhagic shock of normal and vagotomized conscious m... by Fateme Khodadadi, Sujata Punait, Farzaneh Ketabchi, Zahra Khodabandeh, Aminollah Bahaoddini, Gregory F. Lewis

“…Correlations between HRV, hemodynamic parameters, inflammatory gene expression and arterial blood gas variables were evaluated. …”
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Identification of hub genes, non-coding RNAs and pathways in Renal cell carcinoma (RCC): A comprehensive in silico study by Ahmad Golestanifar, Hengameh Khedri, Parisa Noorabadi, Mohammadreza Saberiyan

“…Immune cell infiltration patterns showed significant correlations with hub gene expression, highlighting the importance of immune modulation in KIRC. …”
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Effects of Exercise Training on Molecular Markers of Lipogenesis and Lipid Partitioning in Fructose-Induced Liver Fat Accumulation by Siham Yasari, Denis Prud'homme, Frédérique Tesson, Marek Jankowski, Jolanta Gutkowska, Emile Levy, Jean-Marc Lavoie

“…The present study was designed to investigate the impact of exercise training on lipogenic gene expression in liver and lipid partitioning following the ingestion of a high fructose load. …”
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AAV delivery strategy with mechanical support for safe and efficacious cardiac gene transfer in swine by Renata Mazurek, Serena Tharakan, Spyros A. Mavropoulos, Deanndria T. Singleton, Olympia Bikou, Tomoki Sakata, Taro Kariya, Kelly Yamada, Erik Kohlbrenner, Lifan Liang, Anjali J. Ravichandran, Shin Watanabe, Roger J. Hajjar, Kiyotake Ishikawa

“…Improved cardiac gene expression correlates with virus uptake without an increase in extra-cardiac expression. …”
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Severe and post-COVID-19 are associated with high expression of vimentin and reduced expression of N-cadherin by Esra Yilmaz, Dilek Yilmaz, Ercan Cacan

“…Our findings revealed elevated serum vimentin levels and increased gene expression in severe COVID-19 patients compared to healthy controls. …”
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Blood molecular subtypes to guide precision treatment strategies in systemic juvenile idiopathic arthritis by In-Woon Baek, Jung Woo Rhim, Kyung-Su Park, Ki-Jo Kim

“…GSK3B and p38 MAPK inhibitors showed a significant counteracting effect on the perturbed gene expression of sJIA. Conclusions Neutrophil activation was the key feature in active sJIA. …”
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MicroRNAs as Promising Therapeutic Agents Against Prostate Cancer Resistant to Castration—Where Are We Now? by Mariana Ferreira, Mariana Morais, Rui Medeiros, Ana Luísa Teixeira

“…MicroRNAs are a conserved class of small, tissue-specific, non-coding RNAs that regulate gene expression to preserve cellular homeostasis. Proper miRNA expression is crucial for physiological balance because it affects numerous genetic pathways, including cell cycle control, proliferation, and apoptosis, through gene expression targeting. …”
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Immune-Related Genes Associated with Interstitial Lung Disease in Dermatomyositis by Liu C, Ge Y

“…This study aimed to explore further the possible genetic mechanisms by which this complication occurs.Methods: Gene expression profiles for DM (GSE39454, GSE46239, GSE143323) and ILD (GSE32537, GSE110147, GSE150910) were downloaded from the Gene Expression Omnibus (GEO) database. …”
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Integrated bioinformatic analysis of the shared molecular mechanisms between ANCA-associated vasculitis and atherosclerosis by Xun Hu, Inmaculada Xu Lou, Qilan Chen

“…Methods Microarray data of AAV and AS were examined in a comprehensive gene expression database. Weighted gene co-expression network analysis (WGCNA) and differential gene expression analysis (GEO2R) were performed to identify common genes between AAV and AS. …”
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Prognostic model based on M2 macrophage-related signatures for predicting outcomes, enhancing risk stratification, and providing therapeutic insights in diffuse large B-cell lympho... by Baoping Guo, Ying Duan, Hong Cen

“…This research proposes an novel predictive model that leverages M2 macrophage-associated genes to categorize risk, forecast outcomes, and evaluate the immune profile in patients with newly diagnosed diffuse large B-cell lymphoma (DLBCL) undergoing R-CHOP therapy. Methods: Gene expression data and clinical information from DLBCL patients were retrieved from The Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO) databases. …”
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RETRACTED ARTICLE: Single-cell omics and machine learning integration to develop a polyamine metabolism-based risk score model in breast cancer patients by Xiliang Zhang, Hanjie Guo, Xiaolong Li, Wei Tao, Xiaoqing Ma, Yuxing Zhang, Weidong Xiao

“…Data from The Cancer Genome Atlas, Gene Expression Omnibus, and Genotype-Tissue Expression identified 286 differentially expressed genes linked to polyamine pathways in breast cancer. …”
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New perspectives on DNA methylation modifications in ocular diseases by Fei-Fei Zong, Da-Dong Jia, Guang-Kun Huang, Meng Pan, Hao Hu, Shi-Yi Song, Liang Xiao, Ru-Weng Wang, Liang Liang

“…DNA methylation can regulate gene expression, thereby affecting cell function and signal transduction. …”
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The Roles of MicroRNAs in the Regulation of Rice–Pathogen Interactions by Yanfeng Jia, Kai Wei, Jiawang Qin, Wenxue Zhai, Quanlin Li, Yalan Li

“…In rare instances, they also influence gene expression at the transcriptional level through DNA methylation. …”
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