Covariation Between Microbiome Composition and Host Transcriptome in the Gut of Wild Drosophila melanogaster: A Re‐Analysis by Frances Llanwarne, Adam J. Dobson

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A Transcriptomic Biomarker for Predicting the Response to TACE Correlates with the Tumor Microenvironment and Radiomics Features in Hepatocellular Carcinoma by Wang C, Leng B, You R, Yu Z, Lu Y, Diao L, Jiang H, Cheng Y, Yin G, Xu Q

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Refining the resolution of the yeast genotype–phenotype map using single-cell RNA-sequencing by Arnaud N'Guessan, Wen Yuan Tong, Hamed Heydari, Alex N Nguyen Ba

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Revealing the Molecular Regulatory Mechanism of Flavonoid Accumulation in Tender Leaves of Tea Plants by Transcriptomic and Metabolomic Analyses by Ruiyang Shan, Yongheng Zhang, Xiaomei You, Xiangrui Kong, Yazhen Zhang, Xinlei Li, Lu Wang, Xinchao Wang, Changsong Chen

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BrGSTF12, an anthocyanin-related glutathione S-transferase gene, is essential for light-induced anthocyanin accumulation in zicaitai (Brassica Rapa Var. purpuraria) by Mei Fu, Guihua Li, Mengting Lu, Shizheng Jiang, Umer Karamat, Imran Khan, Juxian Guo

Subjects: “…Transcriptome…”
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Pseudovibriamides from Pseudovibrio marine sponge bacteria promote flagellar motility via transcriptional modulation by Yitao Dai, Vitor Lourenzon, Laura P. Ióca, Dua Al-Smadi, Lydia Arnold, Ian McIntire, Roberto G. S. Berlinck, Alessandra S. Eustáquio

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B Cell Activation, Differentiation, and Their Potential Molecular Mechanisms in Osteoarthritic Synovial Tissue by Lu P, Li Y, Yang S, Yao H, Tu B, Ning R

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Dual-approach co-expression analysis framework (D-CAF) enables identification of novel circadian co-regulation from multi-omic timeseries data by Joshua Chuah, Carmalena V. Cordi, Juergen Hahn, Jennifer M. Hurley

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A comprehensive study on the longissius dorsi muscle of Ashdan yaks under different feeding regimes based on transcriptomic and metabolomic analyses by Tong Wang, Xiaoming Ma, Qingbo Zheng, Chaofan Ma, Zhilong Zhang, Heping Pan, Xian Guo, Xiaoyun Wu, Min Chu, Chunnian Liang, Ping Yan

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The SlDLK2 receptor, involved in the control of arbuscular mycorrhizal symbiosis, regulates hormonal balance in roots by Martín Ramos-Alvelo, Nuria Molinero-Rosales, María Isabel Tamayo-Navarrete, Sanja Ćavar Zeljković, Sanja Ćavar Zeljković, Petr Tarkowski, Petr Tarkowski, José Manuel García-Garrido, Tania Ho-Plágaro

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Multi-Omics Investigation of Fatty Acid Content Variations in Common Carp (<i>Cyprinus carpio</i>) Muscle: Integrating Genome, Transcriptome, and Lipid Profiling Data by Kaikuo Wang, Qi Wang, Yingjie Chen, Yiming Cao, Ran Zhao, Shuangting Yu, Xiaoqing Sun, Yan Zhang, Jiongtang Li

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Transcriptomic Profiling of <i>Misgurnus anguillicaudatus</i> Reveals the Anti-Inflammatory Action of <i>Lonicera japonica</i> Extract in Response to Lipopolysaccharide Challenge by Yue Zhao, Chen Wang, Qiuning Liu

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Integration of transcriptomic and metabolomic analysis reveals light-regulated anthocyanin accumulation in the peel of ‘Yinhongli’ plum by Bo Xiong, Yisong Li, Junfei Yao, Jialu Wang, Linlyu Han, Qingqing Ma, Taimei Deng, Ling Liao, Lijun Deng, Guochao Sun, Mingfei Zhang, Xun Wan, Siya He, Jiaxian He, Zhihui Wang

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Time-resolved dual transcriptome profiling of interactions between tea plants (Camellia sinensis (L.) O. Kuntze) and its anthracnose pathogen Colletotrichum gloeosporioides by Jing-Jing Ye, Han-Qing Gao, Yun-Long Shi, Xin-Yi Lin, Yue-Rong Liang, Jian-Liang Lu, Jian-Hui Ye, Xin-Qiang Zheng

Subjects: “…Time-resolved dual transcriptomics…”
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Longitudinal profiling of host response and oropharyngeal respiratory microbiome reveals dynamic alterations during recovery from community-acquired pneumonia by Lizhe Hong, Lijun Suo, Kang Chang, Hongyun Cao, Jiahui Luan, Fuxin Zhang, Xiaofeng Yu, Xiaohui Zou, Bo Liu, Bin Cao

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UV-Induced Mutants of <i>Metarhizium anisopliae</i>: Improved Biological Parameters, Resistance to Stressful Factors, and Comparative Transcriptomic Analysis by Hao Gao, Yingjie Luo, Qiming Li, Jiaxuan Guo, Bin Wang

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Evaluation of the Effects of Acorns on the Meat Quality and Transcriptome Profile of Finishing Yuxi Pigs by Jinzhou Zhang, Chuankuan Zhang, Shuaitao Meng, Heming Wang, Dongyang Liu, Liping Guo, Zhiguo Miao

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Impact of life adversity and gene expression on psychiatric symptoms in children and adolescents: findings from the Brazilian high risk cohort study by Vanessa Kiyomi Ota, Vanessa Kiyomi Ota, Vanessa Kiyomi Ota, Vanessa Kiyomi Ota, Adrielle Martins Oliveira, Adrielle Martins Oliveira, Adrielle Martins Oliveira, Amanda Victória Gomes Bugiga, Amanda Victória Gomes Bugiga, Amanda Victória Gomes Bugiga, Helena B. Conceição, Pedro Alexandre Favoretto Galante, Paula Fontes Asprino, Julia Luiza Schäfer, Julia Luiza Schäfer, Mauricio Scopel Hoffmann, Mauricio Scopel Hoffmann, Mauricio Scopel Hoffmann, Mauricio Scopel Hoffmann, Mauricio Scopel Hoffmann, Rodrigo Bressan, Rodrigo Bressan, Rodrigo Bressan, Elisa Brietzke, Gisele Gus Manfro, Gisele Gus Manfro, Rodrigo Grassi-Oliveira, Ary Gadelha, Ary Gadelha, Luis Augusto Rohde, Luis Augusto Rohde, Luis Augusto Rohde, Luis Augusto Rohde, Euripedes Constantino Miguel, Euripedes Constantino Miguel, Pedro Mario Pan, Pedro Mario Pan, Pedro Mario Pan, Marcos Leite Santoro, Marcos Leite Santoro, Marcos Leite Santoro, Giovanni Abrahao Salum, Giovanni Abrahao Salum, Giovanni Abrahao Salum, Carolina Muniz Carvalho, Carolina Muniz Carvalho, Carolina Muniz Carvalho, Sintia Iole Belangero, Sintia Iole Belangero, Sintia Iole Belangero, Sintia Iole Belangero

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Identification and functional analyses of drought stress resistance genes by transcriptomics of the Mongolian grassland plant Chloris virgata by Ganbayar Namuunaa, Baldorj Bujin, Ayumi Yamagami, Byambajav Bolortuya, Shintaro Kawabata, Hirotaka Ogawa, Asaka Kanatani, Minami Shimizu, Anzu Minami, Keiichi Mochida, Takuya Miyakawa, Bekh-Ochir Davaapurev, Tadao Asami, Javzan Batkhuu, Takeshi Nakano

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MuCST: restoring and integrating heterogeneous morphology images and spatial transcriptomics data with contrastive learning by Yu Wang, Zaiyi Liu, Xiaoke Ma

Subjects: “…Spatial transcriptomics…”
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